Gene Cpha266_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0641 
Symbol 
ID4569795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp733545 
End bp734168 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content49% 
IMG OID639765239 
Productputative transcriptional regulator 
Protein accessionYP_911120 
Protein GI119356476 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTGTCA ATGAAGTCAT TGAAAAAGCT CTGCGTAAAA CAGTCGCGGT GTTTCCCGAG 
CTTGCTGTAC GAGAGCTGGT GGCCAATGCC CTTATTCATC AAGCTTTCTT TGTTACCGGT
GCCGGTCCAA TGGTTGAGAT ATTCGATGAT CGCATTGAGA TTACAAATCC TGGAGAGCCA
CTGGTGGATA CTCAGCGATT CGTGGATACG CCTCCAAAAT CCCGGAATGA AACATTGGCA
TCGATGATGC GTCGGTTTCG TATTTGCGAA GAGCGCGGGA GCGGTATCGA CAAGGTGATT
GCTCAGATTG AGATCTACCA GTTGCCAGCA CCATTGTTTG AGGTGCCTGA GGGTTTTACT
CGGGTAGTTT TGTTTGCGCA TAAACCTCTT ATTGCCATGG ACAAGGCAGA GCGTGTCCGG
GCCTGTTATC TGCATGCTTG CCTGAAGTAT GTGTCCAGGG AGTTTCTTAC TAATGCATCG
TTACGGGAGC GGTTCGGAGT TGAAGAAAAA AATAAGGCGG CGGTGTCTCG CTACATTCGA
GAGGCAGTAG ATGCAGGTGT AATAAAGCCG TTCGATGAAG ACGCTGCCCG GAAGCTGATG
AAGTATGTTC CTTTCTGGGC TTGA
 
Protein sequence
MPVNEVIEKA LRKTVAVFPE LAVRELVANA LIHQAFFVTG AGPMVEIFDD RIEITNPGEP 
LVDTQRFVDT PPKSRNETLA SMMRRFRICE ERGSGIDKVI AQIEIYQLPA PLFEVPEGFT
RVVLFAHKPL IAMDKAERVR ACYLHACLKY VSREFLTNAS LRERFGVEEK NKAAVSRYIR
EAVDAGVIKP FDEDAARKLM KYVPFWA