Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0617 |
Symbol | |
ID | 4569328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 688486 |
End bp | 692682 |
Gene Length | 4197 bp |
Protein Length | 1398 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639765215 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_911097 |
Protein GI | 119356453 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.536457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA ACTATACAAT AAGCCTCCTT ACAGCGGGAT TTCTATTTGT TGGTTATCTG CTTGTCTGGT TGTCGGTCTA TCGCGCTGAT CATCAGTTGC GCGAACAATT GCTCAAGGAT GTCTATGCCG TTGCTCGGAA TATGGACAAA GAACAGATAA AGGCTCTTTC CGGGACATCA GCAGATCGAT TAAATCCCCA CTACATCGAT CTTAAAGCAA AACTTTCCAG TGGATGCAAA TCCCGGACAA AATGTCGTTT TTTGTATTTG CTTGGAAGAA AAAGTGATAA AACGATATTC TTTCTTGTCG ATTCGGAATT GACGGGTTCC TCCGAGATAT CGCCTCCCGG TCAGGTTTAT GATGAGGCAT CTTCGGTATT ACAGCGTGTT TTCAGAACCG GTCATGCCGA TTCGGAGGGT CCGTTGCCTG ATCGATGGGG CGTATGGGTA ACCGGCTTTG TTCCTCTTGT CGATCAGCAA AGCGAAAAGG TCGTTGCCGT GCTCGGTATG GATGTTGATG CTGCCGATTG GACACTTGAT ATAGCCGCCC GTTCAGCATT GCCCATAGGA GTCGTGATCA TCATTATTAT CGTTATTGTC ACTATTCTTC AGTCAACCCG TCATCGAGAG ATTACATCAA GTCCTTTTCT GAGACGACTT TTGCCAGTGC TTCTTGCCGT ATTGTTCTTT CTTTTTTTTG GATTCGGCGT GCTTTTATGG TGGTTGCAGG AACGACGAAT TGAAGAGGTT GTTCATCAGA CGGAAAAAGA GGTTTTTACC GTATTTCAAA ATGCACTTAT GGTACAGTCG GAAGGGCTTG AAATTGCTTT GAATATGATT TGTACTGATA ATACGGTTGC CGATGAACTG AAAAGCCGCA ATAGCGAGAT CCTCTATTCG AAATACGAAC CGCTTTTCAG ACATCTTCAA GATAAGCACG GGGTCTCTTT TTTTTGTTTT ATGGATTCTT CCCGCAAATG TCTGCTGCGT TTGCATAAAC CGGAAAAGTC CGGTGATCGT ATCAGTCGCT TTACCCTTCT TGAAGCTCAA AAAACAGGTC TTTTTTCAAA CGGTCTGGAG CTTGATCCCA AAGGTCTTTT GACCCTGAGG GTCGTGATGC CTGTTTTTCA AAAAGGGAGG ATTGTCGGTT TTATTGATGT TGCCAAAGAG ATTGAAGCGG TTATTAACCG TGTTCATTAT CAGCCGGGTC TTGGCATTGC ACTTATTGTC GATAAAAAGT TTCTTCATAG AGGTGATTGG GAAAAGGCAA TGCATGCGCT TGGAAGAAAA ACCGAGTGGG ATCGATTCAG AGATGAAGTT CAGATTTATA ATACGTTTGG CTATTTTCCC GAAGCATTCG ATTTTTCTCT GGCCTCTTCA GACTCTGTAG CGTTCTATCG CAGCCGGGCA GTAACATGGC AAGGAAAATC CTGGAGGCTT AATTTCCTTC CGCTTGAAGA CGCATCAGGC AGAACAATCG GAAGAATGCT TGTGATTCAG GATGTTTCGT TTTATCAGGC GGGCATCTTT CGAATGATCA CTCTTGCGGG GATTGCACTT CTTGTTATTC TTTCGTTGCT TTTCGGCTTT CTGTTTGTTG TTTTAAAGCG AATCGACAGA GGTGTTATCA ATCGGGAGCA GGAGCTCATA GATAGTCGTG AACAGTACAG GCTTGCCGTT AACGGAAGTA ATGATGGAAT TTGGGACTGG GATATGAGAA GCGACACCTT GTATCTTTCA CCTAAATGGA AAAAGACGCT TGGATATGAA GATGATGACC TTTCAAATAT CTATAAGACA TTTGAAGATC TGGTTCATCC CGAAGACAAG CCGGTATTCA GAACGTATCT TGACCGATAC CTGAATGGTG AAATTCCCCT GTTTAATATT GAGTTCAGAA TTCGGCACAA GGATGGTGCT TATGTATGGA TTCTTGGGCG GGGTGAGGTG CTTCGTGACA AATCCGGTTC CCCATACAGG ATGGCTGGTT CCATGAGCGA TATTACCGGC AGGAAAAAAG ATGAGGATGA ACTGAAACGA CGTTCTGCTT TTCAGCTTGT GGTGATGGAT CTGGCAATCG GATTTGTCAA TACGCCACTT GACGAGCTTG ATCGATCCAT AGAGAGAGCG CTTGCTCTTG TCGGCGAGTT TTTGCAGGTT GATCGTTCCT ACCTTTTTCG TTATGATTTT GCCAACGGGA CGATGAGCAA CACACATGAA TGGTGTTCAG AAGGAATCGC TCCTGAAAAA AATAATCTTC AGAACCTTCT TAACTCAATT ATCCCTGACT GGGTTGCAAC CCATCTTGCG GGCAGAATTG TTCACATTTC AAGCGTTGAT GCTCTGGATG ATGAAAGTGC CCTCAAAATG ATATTGGCAT CGCAGGGCAT CAAGACACTG ATTTCCCTTC CGCTCATTTA TCATGAACAC TGTTTTGGTT TTGTAGGGTT TGATGCCGTA AGAGAAGTGA AAAAATGGGG CGATGATGAA ATCTCACTGC TCCGGGTTTT AGCGGAGTTA TTTACCAATG CGGAACTGCG TTTCCGTCAT GAGACAGCTC TTGTTGATGC CCGATATGCT GCCGAATCAG CAAATCGAGC TAAAAGCGAA TTTCTTGCCA ATATGAGTCA TGAAATCCGC ACTCCGATGA ATGGCGTGAT TGGAATGGCA AATCTGCTTC TTGATACGGA TCTTTCTGAT GAACAGAGGG ATTTTGCGGA CATGCTTCTT GCGAGCGGAG AGTCCCTGTT AACGGTTATC AATGATATTC TTGATTTTTC AAAAATTGAG GCAGGAAAGC TTGAGTTGGA ACATATCGTT TTTGATCTTC GTAAGCTCCT GGAGAGTTTT GGCGCGGTTA TGGGTCTCAA AGCAGTTGAG AAAAACCTTG AATTCAACTG TGTTGTATCT CCTGAAGTTC CGGTATTTTT CAAAGGCGAT CCCGGCAGGA TTCGGCAGAT TCTTAATAAT CTTGCCGGCA ACGCAATCAA ATTCACTCAA AACGGTAACG TAACTGTTGC CGTATCCATG CAGTCTGAAA ATAATGGTGA TGCTGTTCTT CGTTTTTCTG TAAAAGATAC CGGTATAGGA ATACCGGAGG CAAAGCTTGA CAGATTATTC AAAAGTTTTA CGCAGGTTGA TGCATCAACA ACAAGAAAGT ATGGCGGGAC GGGTCTTGGT CTTGCAATCA GCAGGCAATT GGTTGAGCTT ATGGGCGGGA AAATTGGTGT GATCAGTCAT GAGGGCAATG GTTCCGAGTT CTGGTTTACG ATTTTTTTGA AAAAGCAGCC GTTTTACAGC ACTATCGAAA CGCAGCCGAC GTCGGCGTTT GCCGGAATCA GGGCTCTTGT TGTCGATGAT AATGCTGCAA ATCGCAAAAT GCTGAAAGCT CTGCTTTCAT CATTGGATAT CCGTGTTACT GAAGCATCCG GTGGCGATGC TGCTCTGGGA GAACTTCGGA GCGCTTTCAA AAGCGGCGAT CCCTTTGCGC TGGCCATTAT TGATATGCAG ATGCCGGATA TGGATGGTTT TATGCTCGGT CAAACAATAA AAGAGGATTT GCTTTTGCGC AATACGGAGC TCTTTCTTAT GAGTCCGGTC GGTACATTAA ATCAACGTGA AGAGTATCAC CGGGCAGGGT TTTCTGCCAA TCTGTCAAAG CCTGTCGGTC AACTGGAACT TGTTGCGGCA ATAAACAAAG TTGTTTTCAA TCATGATAAC CAATCGGGAA GTCGAAATCC ATCGATAAGT TATCCGGTAA CAGAAGAAGG TGAACCTCCG ATGGTTCCTG TTGGAAAACT GGAGCATTAC CGTATTCTGC TTGCTGAAGA CAGTCGTGTC AACCAGATGG TGGTTATAGG GGTACTGACG AAGTTTGGAT ATGGTGTCGA TGTGGTTTCA AATGGGCAGG AGTGTGTTGA TGTCCTCCAA AAGAGAACAT ATGATCTGGT GTTAATGGAT GTTCAGATGC CTGTTATGGA TGGATTGAAC GCAACAGGAA TTATCAGAGA TCCGGCATCA AAGGTTCTCG ATCACAACAT TCCGGTTATT GCTTTAACAG CGCATGCCAT GCAGGGTGAC AGGGAGAGTT GTCTTTATGC GGGGATGAAT GACTATATCT CAAAGCCGAT TGATGCCTCT GTTCTCACCG AAACCATCAG CAAGTGGCTG CCGGTTAAGC CGGATTCGCC TGCATAA
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Protein sequence | MKKNYTISLL TAGFLFVGYL LVWLSVYRAD HQLREQLLKD VYAVARNMDK EQIKALSGTS ADRLNPHYID LKAKLSSGCK SRTKCRFLYL LGRKSDKTIF FLVDSELTGS SEISPPGQVY DEASSVLQRV FRTGHADSEG PLPDRWGVWV TGFVPLVDQQ SEKVVAVLGM DVDAADWTLD IAARSALPIG VVIIIIIVIV TILQSTRHRE ITSSPFLRRL LPVLLAVLFF LFFGFGVLLW WLQERRIEEV VHQTEKEVFT VFQNALMVQS EGLEIALNMI CTDNTVADEL KSRNSEILYS KYEPLFRHLQ DKHGVSFFCF MDSSRKCLLR LHKPEKSGDR ISRFTLLEAQ KTGLFSNGLE LDPKGLLTLR VVMPVFQKGR IVGFIDVAKE IEAVINRVHY QPGLGIALIV DKKFLHRGDW EKAMHALGRK TEWDRFRDEV QIYNTFGYFP EAFDFSLASS DSVAFYRSRA VTWQGKSWRL NFLPLEDASG RTIGRMLVIQ DVSFYQAGIF RMITLAGIAL LVILSLLFGF LFVVLKRIDR GVINREQELI DSREQYRLAV NGSNDGIWDW DMRSDTLYLS PKWKKTLGYE DDDLSNIYKT FEDLVHPEDK PVFRTYLDRY LNGEIPLFNI EFRIRHKDGA YVWILGRGEV LRDKSGSPYR MAGSMSDITG RKKDEDELKR RSAFQLVVMD LAIGFVNTPL DELDRSIERA LALVGEFLQV DRSYLFRYDF ANGTMSNTHE WCSEGIAPEK NNLQNLLNSI IPDWVATHLA GRIVHISSVD ALDDESALKM ILASQGIKTL ISLPLIYHEH CFGFVGFDAV REVKKWGDDE ISLLRVLAEL FTNAELRFRH ETALVDARYA AESANRAKSE FLANMSHEIR TPMNGVIGMA NLLLDTDLSD EQRDFADMLL ASGESLLTVI NDILDFSKIE AGKLELEHIV FDLRKLLESF GAVMGLKAVE KNLEFNCVVS PEVPVFFKGD PGRIRQILNN LAGNAIKFTQ NGNVTVAVSM QSENNGDAVL RFSVKDTGIG IPEAKLDRLF KSFTQVDAST TRKYGGTGLG LAISRQLVEL MGGKIGVISH EGNGSEFWFT IFLKKQPFYS TIETQPTSAF AGIRALVVDD NAANRKMLKA LLSSLDIRVT EASGGDAALG ELRSAFKSGD PFALAIIDMQ MPDMDGFMLG QTIKEDLLLR NTELFLMSPV GTLNQREEYH RAGFSANLSK PVGQLELVAA INKVVFNHDN QSGSRNPSIS YPVTEEGEPP MVPVGKLEHY RILLAEDSRV NQMVVIGVLT KFGYGVDVVS NGQECVDVLQ KRTYDLVLMD VQMPVMDGLN ATGIIRDPAS KVLDHNIPVI ALTAHAMQGD RESCLYAGMN DYISKPIDAS VLTETISKWL PVKPDSPA
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