| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0605 |
|---|
| Symbol | |
|---|
| ID | 4569316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 678613 |
|---|
| End bp | 679137 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639765203 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_911085 |
|---|
| Protein GI | 119356441 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.946686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATGG TTGATTCTCC CAATGAACGC CGGGCTAAAA AAGGCAGAAA GCGGATTCGC
AAGAGGATCG GTTTTCATCT CGATATGACC CCTATGGTGG ATGTAGCGTT TTTATTGCTG
ACCTTCTTCA TGCTGACGAC TACTTTTGCG AAGTCCAATA CTATGGAGAT CAGCATGCCG
CCTGAGATGG AGGAGGTGAA GATCGCTGAA GCAAATGTCA TGACGTTGAG AATTTCAGGA
GAAGGCATGG CTTATTGTTC GCTCGGTAAT GAGGCGCCTC GCCGGCTTTC GTTGTATGAG
AGTGGTGACG CCAGCAGGTT TGCCTTGAGT GCTGAACTGC GGCAGATCTT GAAACAGCAG
ACCACAGCCA ATAAAAAGCT GGTTATTGTG TTGAAAATCA GTGAAAAAGC AAAGTATAAG
TATCTGGTTG ATGTTATTGA TGAGTTGAAT CTTATGAAGA TTGACCGGTT CAGTCTTGAT
GATTTTACTG ATCAGGATGA ACTTGAAATC AAAAGGGCGG TTTAG
|
|---|
| Protein sequence | MGMVDSPNER RAKKGRKRIR KRIGFHLDMT PMVDVAFLLL TFFMLTTTFA KSNTMEISMP
PEMEEVKIAE ANVMTLRISG EGMAYCSLGN EAPRRLSLYE SGDASRFALS AELRQILKQQ
TTANKKLVIV LKISEKAKYK YLVDVIDELN LMKIDRFSLD DFTDQDELEI KRAV
|
|---|
| |