Gene Cpha266_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0588 
Symbol 
ID4568708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp658124 
End bp659035 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID639765186 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_911068 
Protein GI119356424 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGT CAGCAAAAAT CTGGATGAAC GGCGAGCTCA TCGACTGGAA TGATGCAAAA 
ATCCACATCA TGTCCCATGT CGTTCATTAC GGGTCATCGA TATTTGAAGG AATCCGCTGC 
TATGACACAG AAAAAGGCTC TGCCATTCTT TTTCTGGATG AACATATCAA ACGACTCAGG 
GATTCGTCAA AAATATACCG TATCGAAATC CCCTATTCTG AAAAAGAGCT GAAAGAAGCA 
ATAATCAGCA CGATTAAAAC CAACGAGCAC AAATCATGTT ATGTCCGTCC TCTCGTCTAC 
CGCGGTCAGG GCGCACTTGG CGTCAATCCT TACCGGGCAT CTATTGAGGT TGCTATTGCC 
ACCTGGGAAT GGGGCACCTA TCTTGGTGAC GACGTTCTTG AAAACGGCGT CGATGTCCGC 
GTTTCCTCAT GGAGTCGCCT GGCCCCGAAC ACGCTCCCTT CATGGGCAAA AGCCGGAGGC 
AACTATCTGA ACTCCCAGCT TATAAAAATG GAAGCCCTGA TGGACGACTA TGCAGAGGGA 
CTTGCTCTCG ACATCAACGG CTACGTTTCT GAAGGAAGCG GAGAAAATAT CTTCGTGGTT 
CGCGATGGAA TCATCTACAC CCCGATGTCC GCACAGTCAA TCCTGCCAGG ATTCACCAGG 
TTTGCGGTCA TGCACATCGC AAAAAAGCTT GGCTACGAAG TCCGTGAATC CCTTATTCCA 
AGGGAGGCAC TTTATGTTGC CGATGAAGTT TTTCTTACCG GAACGGCGGC AGAAATAACC 
CCGGTCAGAA GTATCGACAA ATACCCTGTC GGCAATGAAA AACGTGGACC GGTTACCGAA 
GTACTGCAAC ACAACTACCT TAAAATAGTG CAGACCGGTG AAGATCCCTA TAACTGGCTT 
ACCTTTATCT GA
 
Protein sequence
MNKSAKIWMN GELIDWNDAK IHIMSHVVHY GSSIFEGIRC YDTEKGSAIL FLDEHIKRLR 
DSSKIYRIEI PYSEKELKEA IISTIKTNEH KSCYVRPLVY RGQGALGVNP YRASIEVAIA 
TWEWGTYLGD DVLENGVDVR VSSWSRLAPN TLPSWAKAGG NYLNSQLIKM EALMDDYAEG 
LALDINGYVS EGSGENIFVV RDGIIYTPMS AQSILPGFTR FAVMHIAKKL GYEVRESLIP 
REALYVADEV FLTGTAAEIT PVRSIDKYPV GNEKRGPVTE VLQHNYLKIV QTGEDPYNWL 
TFI