| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0556 |
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| Symbol | |
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| ID | 4569423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 620290 |
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| End bp | 622095 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639765154 |
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| Product | signal peptide peptidase A |
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| Protein accession | YP_911036 |
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| Protein GI | 119356392 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGATG TCAATAAAAA ATCCGGTTGC TGGAGAATCG GCTGTTTTTC GTTTGTTGTT
GTGCCGATTC TCATAGCGGT ATCGGCTTTT TTTTATTTCC GTTCATCCTA TGTTCTTCCG
GACAAATTTG TTTTGAGCGT TCCCATTCAG GGAAATCTTG ATGAGGTGCA CTCCCTGAGC
TCTTCGTTGC CGTTACTTTC GTCAGCCGAA CCGCTGTCGT TTCAGGATCT GCTTTTTCTT
TTCGATCATG CTGCCGGCGA CAAGAGGATA GGTTCGATTT TGCTTGAAAT AGGGGGAGTG
CATGCCAATC CGGCCAAGTT GACGGAACTC AGGTATTCAA TCGAAAAGAT GAAGGCTTCC
GGGAAAAAAG TTGTGGCTTT TCTCCGTTCG GCAGAGGACA GCGACTATCT GCTTGCGACG
GCCTGTGATT CAATTGTTGT TGAGGAGGGG GGCTTTCTGA TGCTTGACGG CCTCAAAGCC
GAGACACTGT TTTATACCAA ATCGCTCAAT AAAATAGGCA TCACTTTCCA GGCATCTCAA
TGGAAAACGT ACAAAAGCGG CATTGAGCCA TTTGTCAGAA CAGGGGCAAG TTCCGAGTAT
CTTGAACAGA TCGGCGAGCT CCTTGACGAC GTGTACGACG ACTATCTCGG CTATGCTTCG
AAACGCAGAG GTATAAGCCG TGATTCATTG CAGGCGGTTA TCGACAACAT GGCGCTGCTT
TCGGCAAAAA AAGCGGTTCA GCTTGGCCTT GCTGATGGCA TTGCTTCGTC CTGGGCTCTT
AACCGCTCAC TTGCCGGAAA AATAACCGGA AGGGAACCGG AGCGTGGTGA TGATGTGATG
GTGAGTGCGG AGCGTTACCG TGATTCGGTT GAACCGAATT ATAATGCTGA CGGGCGTGAT
GCAATTGCCT TGATTACCCT TTCGGGTCCG ATCTACCGTT CAGGTGGCGC TTCCGGTATG
GGTGTTGCCG AAGGGTTTGA CGAAAAGCTT TTGCAGCGCT CTCTGGAGGT TGCGCTTGAT
AATCGTGACG TCAAGGCTTT GGTGTTGCGT ATCGACAGCC CGGGAGGAGA TGCGCTTGCT
TCGGCTGATA TGCTCGAGAT GCTTTATTTT GCAGCAAAGA AAAAGCCGAT TGTAGTTTCC
ATGTCAGGGG TAGCGGCTTC CGGTGGATAT ATGGCAGCGC TGGCGGGGAA TAAAATTTTT
GCAGAGCCGC TTACCATTAC CGGGTCGATA GGGGTCTATG CGCTGAAGCC GGAAATCAGC
GGCCTTGTGG AAAAAACAGG TTTGCAGCGC GAGGTTGTCA CTCGCGGCAG GTATGCCGAT
GCAACTTCGC TTTTCAAGCC GCTTGACAAG GATGCTTACG ATAAATTTGT TGCCGCTTCC
GGCGACGTCT ATCATGATTT TGTCAGCAAG GTCGCCACGT CAAGAAAGAT GCGGTGGGCT
GCTGCCGATT CGGTAGCCGG GGGGAGGGTC TGGAGCGGAA AAAGAGCGTT GCAGGCAGGA
CTGATTGACA GCCTCGGCGG GCTGCACGAT GCCATCCGGG AGGCTCAGAT TCTCGGTAAA
ATAGACAAGA CGAAAAAACC TCGTATTCTC TTTTATCCTG AACGGAAAAG CTGGATGGAA
TCTCTTGCGG AGGGTGACTT TTCCGGCTTC TCCCGGAGCG TGACTATTGC GTTGAAGCAG
CGTCTGATCC ATGAGCTTGT TCCTGAAGGC CAATCAAGCT CCATCACTGC TTTTTACGAC
ATGCTGATGG TCTCAGGCCA ACTGCATCTG ATTGCAGCTC TGCCCGGCGA GGTCGTTATC
CGCTGA
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| Protein sequence | MKDVNKKSGC WRIGCFSFVV VPILIAVSAF FYFRSSYVLP DKFVLSVPIQ GNLDEVHSLS
SSLPLLSSAE PLSFQDLLFL FDHAAGDKRI GSILLEIGGV HANPAKLTEL RYSIEKMKAS
GKKVVAFLRS AEDSDYLLAT ACDSIVVEEG GFLMLDGLKA ETLFYTKSLN KIGITFQASQ
WKTYKSGIEP FVRTGASSEY LEQIGELLDD VYDDYLGYAS KRRGISRDSL QAVIDNMALL
SAKKAVQLGL ADGIASSWAL NRSLAGKITG REPERGDDVM VSAERYRDSV EPNYNADGRD
AIALITLSGP IYRSGGASGM GVAEGFDEKL LQRSLEVALD NRDVKALVLR IDSPGGDALA
SADMLEMLYF AAKKKPIVVS MSGVAASGGY MAALAGNKIF AEPLTITGSI GVYALKPEIS
GLVEKTGLQR EVVTRGRYAD ATSLFKPLDK DAYDKFVAAS GDVYHDFVSK VATSRKMRWA
AADSVAGGRV WSGKRALQAG LIDSLGGLHD AIREAQILGK IDKTKKPRIL FYPERKSWME
SLAEGDFSGF SRSVTIALKQ RLIHELVPEG QSSSITAFYD MLMVSGQLHL IAALPGEVVI
R
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