| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0525 |
|---|
| Symbol | |
|---|
| ID | 4569120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 578698 |
|---|
| End bp | 579240 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639765124 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_911006 |
|---|
| Protein GI | 119356362 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGTC CTCAGGAAAC GCTGTTACTT GTTATCGATG TTCAGGGAAA ACTTGCATCG
AGTGTTTTTC ATGCTGAACG TGTCGAGAAA AATATTGATA AACTGATTCG TGCCTGCCGG
ATTCTTGACG TGCCTGTGCT TTACACCGAG CAGTATCCCA AAGGGCTTGG ATCAACAGTC
GAGCCTTTGC GGCGATTGCT TTCCGGTCAG GTGCCGGTTG AAAAGCTGTC GTTCAGTTGT
TGCGGAAGCG AAGAGTTTAT GAGGCAATTA CGTGCTTTCA AGCGGAACGA TATTCTTGTT
ACCGGCATGG AGACGCATGT TTGCGTGTAT CAGACTTCTT TAGAGCTGCT TGATTTCGGG
TATTCCGTGC ATCTGGTTAC TGACGCCGTT TCGTCGAGGA GCGAAGAGAA CCGACAGCTC
GGGATTCGCT GTATTGAGAG AGCGGGGGCA ACTCCTACAA GCACTGAAAT GGCGGTATTT
GAGCTGCTTC GCATTGCTGA GGGCGAGCAA TTCAAGGAGA TTTCGAAAAT CATCAAGGAA
TAA
|
|---|
| Protein sequence | MISPQETLLL VIDVQGKLAS SVFHAERVEK NIDKLIRACR ILDVPVLYTE QYPKGLGSTV
EPLRRLLSGQ VPVEKLSFSC CGSEEFMRQL RAFKRNDILV TGMETHVCVY QTSLELLDFG
YSVHLVTDAV SSRSEENRQL GIRCIERAGA TPTSTEMAVF ELLRIAEGEQ FKEISKIIKE
|
|---|
| |