Gene Cpha266_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0501 
Symbol 
ID4569271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp550085 
End bp550735 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content49% 
IMG OID639765100 
ProductDNA-(apurinic or apyrimidinic site) lyase / endonuclease III 
Protein accessionYP_910982 
Protein GI119356338 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCT CACCGAAGGA AAAAATAACC TTCATAAAAA AAGCTCTCGG CTCAGTTTAT 
CCTGAACCGA AAAGCGAGCT GCAGTACGCC TCAGCCTTTC AGCTCCTTAT TGCAACCATC 
CTTGCAGCGC AGGCAACCGA CAAAAAGGTA AATGAAGCAA CCAAAGAGCT GTTTCTGCTC 
TGTCCTGATG CGCTGAGCAT GAGTCGTACT GAACCTGATA CGATCAAACA ACTTGTTCGC 
ACACTTAACT ACTTCAACAA CAAGGCAGCA AACATCCTGG CCGTAAGTTG CCGACTTGTT 
GAGGAGTTTA ATGGAGAGGT TCCCCCCAAC AGGGAGGCGC TTGAATCGCT GCCGGGAGTT 
GGGAGAAAAA CAGCCAACGT AGTGCTTGCC AATGCATTCG GCCAACCGGT CATGCCGGTC 
GATACCCATG TGCACAGGGT ATCCAACCGT ATCGGGCTCT GCGCCACATC AAAACCCGAG 
CAGACAGAAG AGGCCCTTAC GAACATCATT CCCGAACCAT GGATGATCGA CTTTCATCAC 
TACCTTTTAC TTCACGGACG CTATACCTGT AAAGCAAAAA AGCCGGCATG CGCAGATTGC 
GTGCTTAAGG AAATCTGCGC CTTTAAGGAT AAAAATCCGA TCGCAGACTA A
 
Protein sequence
MQRSPKEKIT FIKKALGSVY PEPKSELQYA SAFQLLIATI LAAQATDKKV NEATKELFLL 
CPDALSMSRT EPDTIKQLVR TLNYFNNKAA NILAVSCRLV EEFNGEVPPN REALESLPGV 
GRKTANVVLA NAFGQPVMPV DTHVHRVSNR IGLCATSKPE QTEEALTNII PEPWMIDFHH 
YLLLHGRYTC KAKKPACADC VLKEICAFKD KNPIAD