| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0475 |
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| Symbol | |
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| ID | 4568519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 523801 |
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| End bp | 525831 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639765074 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_910956 |
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| Protein GI | 119356312 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG CCGTCAATGT CCGCAAGGCT ATAGAAGAAC TACGCAGGGA GATCAACAGG
CACAATACGC TCTACTATGT TGATGCCCGT CCTGAAATTT CCGATTACGA GTTTGATCGG
TTGATGGAAC GCCTCATCGA ACTCGAAAAG GCTTTTCCGG ATTTTGTCAC ACCGGACAGC
CCTTCTCATC GGGTTGGTGG TGCAATTACC AGAGAGTTTC CTTCGGTACG GCACAGGGAG
CCGATGCTGA GCCTTTCCAA TACCTACTCG CTTGCAGAGG TCGAGGATTT TTACAGTCGG
GTGAAAAAAC TTCTGCTGGT GGAAGGGGTG CGCGAGCAGG ATATGGCAGC CGAACTGAAG
TTTGACGGGG TGGCCATAAG TCTGCTGTAT CGCGATGGTC TTCTCGTTCA GGGTGCGACA
AGAGGTGACG GTACCGAGGG GGACGATATT ACTACAAATC TGAAAACCTT GTCGAGTGTG
CCGCTCAGGA TTCCTCTGAC AAGCCTTCCG GTTATTGAGG GCATAGAGCG CGATATCGAG
ATCCGCGGAG AGGTGTTCAT GCAGAAGGAT GATTTTGCCC GTCTTAACGA GGCTCGTCCT
GAAGAAGACC GGTTTGCCAA TCCTCGTAAT GCAACTGCCG GAACGCTTAA ATTGCAGGAT
TCCGGAGAGG TTGCCCGTCG ACGTTTGAAT TTTGTGGCTT ATTATCTGCG GCTTTCGAGC
CAGGACTCTT TTCTGCTTAC CCAGTATGAC CGGCTTGAAC TGCTCGGGCA GCTCGGTTTC
TTTACCGGGA AGCACTACAG GTTATGTCGC GATATGAAGG AAATCGGTGA TTTTATCGGC
TATTGGGCCG TTGAGAGGTG GAACCTTCCT TATGAAACGG ACGGAGTTGT CCTGAAACTC
AACGATGTCG CACTATGGCC GAGAATTGGC GCAACCGCAA AAAGTCCTCG CTGGGCTATT
GCCTACAAGT ATCCCGCACA GCAGGCGAAA ACAGTTCTGC AAGGGGTGGC ATTTCAGGTC
GGCAGACTCG GAACGGTGAC TCCTGTTGCT GAACTTGAGC CTGTTCGGCT TGCCGGTTCA
ACGGTGTCGC GTTCAACCCT GCATAATTTT GACGAGATAG AGCGGCTTGG TCTCATGCTT
CATGATCGGG TGATTATTGA AAAATCAGGG GAGGTTATCC CCAAAGTGAT TCGGGTTGTT
CTCGATGAAC GACCCGAAAA TGCAGAGCCT GTCGGCGTGC CTTCGGTTTG TCCCGAGTGC
GGCGCTTCGC TCGAAAAACC CGAAAACGAG GTCAGTTACT ACTGTCCCGA TCAAGATTCG
TGCCCGGCAC AGATCAGGGG ACGCTTGCTC CATTTTGCTT CGCGAAATGC CCTTGACATT
CAGTCGCTTG GTGAATCGCT GGTCGCTCAG CTTGTTCAAA AGGGTCTTGT GAGGGATGCC
GGAGATCTTT ATCTTCTTCA GCAACCGCAG CTTGAGGCTC TTGAGAGGAT GGGACGAAAA
TCGGCGCACA ATCTCCTTCG CGCACTTCAA GAGAGTCGGG AGAAGAGTTA TGAACGCTTG
CTCTATGCGC TTGGGATTCG TCATGTCGGT CAGGCTACGG CCCGTGAACT TGCCAGGGCC
TATGAGACGG TTGAGGCCTT GCAGAATGCT TCGGAGGAGG AGCTCGCAAC GGTGCCTGAT
GTCGGGCCGG TTGTTGCCCA TAGCGTCAAG GACTATTTTT CAAAATCGTC TACACAGATG
CTGCTCCGGA AACTCAGGGA TGCCGGCTTT CCTTTACGTT TCACCGGGCC TCAAAAGCTG
ATCAACAGGA ATTTCGAGGG TGTGAATGTT CTGTTTACGG GAGCGCTCGA ACGGTATGGA
CGGCAACAGG CATCGGAACT TGTTCAGCAA CGGGGAGGGA GGGTTGTTGG TTCGGTCAGC
AGAAGCACCG GAGTTGTTGT TGCCGGTAGT GAACCCGGCA GCAAGCTTGA CAAAGCGAGA
AAGCTCGGCG TAAAGGTGAT CAGCGAGGAT GAATTTAATG CAATGTTGTA A
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| Protein sequence | MSDAVNVRKA IEELRREINR HNTLYYVDAR PEISDYEFDR LMERLIELEK AFPDFVTPDS
PSHRVGGAIT REFPSVRHRE PMLSLSNTYS LAEVEDFYSR VKKLLLVEGV REQDMAAELK
FDGVAISLLY RDGLLVQGAT RGDGTEGDDI TTNLKTLSSV PLRIPLTSLP VIEGIERDIE
IRGEVFMQKD DFARLNEARP EEDRFANPRN ATAGTLKLQD SGEVARRRLN FVAYYLRLSS
QDSFLLTQYD RLELLGQLGF FTGKHYRLCR DMKEIGDFIG YWAVERWNLP YETDGVVLKL
NDVALWPRIG ATAKSPRWAI AYKYPAQQAK TVLQGVAFQV GRLGTVTPVA ELEPVRLAGS
TVSRSTLHNF DEIERLGLML HDRVIIEKSG EVIPKVIRVV LDERPENAEP VGVPSVCPEC
GASLEKPENE VSYYCPDQDS CPAQIRGRLL HFASRNALDI QSLGESLVAQ LVQKGLVRDA
GDLYLLQQPQ LEALERMGRK SAHNLLRALQ ESREKSYERL LYALGIRHVG QATARELARA
YETVEALQNA SEEELATVPD VGPVVAHSVK DYFSKSSTQM LLRKLRDAGF PLRFTGPQKL
INRNFEGVNV LFTGALERYG RQQASELVQQ RGGRVVGSVS RSTGVVVAGS EPGSKLDKAR
KLGVKVISED EFNAML
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