Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0438 |
Symbol | |
ID | 4569227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 484431 |
End bp | 485300 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639765038 |
Product | ABC transporter related |
Protein accession | YP_910920 |
Protein GI | 119356276 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATCC TCTCGATTAC CAAAACGCTC TCTGGCGCTG AAGGGCCTTT TGAACTCTCG CTCGATCTCT CGCTGCAACC TGAAACACTG CACACTCTCT TCGGGAGATC GGGAAGCGGA AAAACGACGA CCCTCCGTAT CCTTGCCGGG CTGACACAAC CAGACAGCGG ACATATCGAG GTAAACGGCA GGGTATGGCT CGACAGCGCC GCAAAAATCA ATCTGCCTCC CCAGAAAAGA AAGGTGGGGT TTGTTTTTCA GGACTATGCG CTTTTTCCGA CCATGACGAT AAAGGAAAAC CTGCTCTTTG CCCAGAAAAC AAAAAACGAA CAGAAAGTTA ACGAACTTCT TGAACTTACG CACCTTTCTG TGCTCCATAA CCGCTATCCA ACAAAGCTGT CGGGAGGGCA GCAACAGAGA GTTGCCCTTG CCCGTGCAAT TCTTCGGGAA CCCGACATCC TGCTGCTCGA CGAACCGCTT TCAGCGCTTG ATCAGAGCAC CCGCCTCAGG CTCCAGGATG AAATCATGAG CTTTCACAAA CGGTTCCGTC TGACAACCGT TCTTGTTTCT CATGACAAAC AGGAGGTCTT CAAACTCTCC GACAGGGTAA CCGTTATTGA CCGGGGCCGG ATAATCCGCA CGGGAAGCCC TCTTGAGGTT TTTCTCGACC GAACCACCTC AAACAAATTT TCATTTGCAA GCACCATCCT GAGTATCCGC AAGGTTGACT GCATCTACCT TGCCGTTATC GGGGCGGGAA ATGAGCTGGT TGAAGTCGTG CTGAGCAGGC ATGATTTCGA AACCCTCAAG GTCGGCGACG AGGTTCTTGT CGCCTCAAAA GCATTCAATC CCCTTGTCAT CAAATTGTAA
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Protein sequence | MIILSITKTL SGAEGPFELS LDLSLQPETL HTLFGRSGSG KTTTLRILAG LTQPDSGHIE VNGRVWLDSA AKINLPPQKR KVGFVFQDYA LFPTMTIKEN LLFAQKTKNE QKVNELLELT HLSVLHNRYP TKLSGGQQQR VALARAILRE PDILLLDEPL SALDQSTRLR LQDEIMSFHK RFRLTTVLVS HDKQEVFKLS DRVTVIDRGR IIRTGSPLEV FLDRTTSNKF SFASTILSIR KVDCIYLAVI GAGNELVEVV LSRHDFETLK VGDEVLVASK AFNPLVIKL
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