Gene Cpha266_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0438 
Symbol 
ID4569227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp484431 
End bp485300 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content51% 
IMG OID639765038 
ProductABC transporter related 
Protein accessionYP_910920 
Protein GI119356276 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATCC TCTCGATTAC CAAAACGCTC TCTGGCGCTG AAGGGCCTTT TGAACTCTCG 
CTCGATCTCT CGCTGCAACC TGAAACACTG CACACTCTCT TCGGGAGATC GGGAAGCGGA
AAAACGACGA CCCTCCGTAT CCTTGCCGGG CTGACACAAC CAGACAGCGG ACATATCGAG
GTAAACGGCA GGGTATGGCT CGACAGCGCC GCAAAAATCA ATCTGCCTCC CCAGAAAAGA
AAGGTGGGGT TTGTTTTTCA GGACTATGCG CTTTTTCCGA CCATGACGAT AAAGGAAAAC
CTGCTCTTTG CCCAGAAAAC AAAAAACGAA CAGAAAGTTA ACGAACTTCT TGAACTTACG
CACCTTTCTG TGCTCCATAA CCGCTATCCA ACAAAGCTGT CGGGAGGGCA GCAACAGAGA
GTTGCCCTTG CCCGTGCAAT TCTTCGGGAA CCCGACATCC TGCTGCTCGA CGAACCGCTT
TCAGCGCTTG ATCAGAGCAC CCGCCTCAGG CTCCAGGATG AAATCATGAG CTTTCACAAA
CGGTTCCGTC TGACAACCGT TCTTGTTTCT CATGACAAAC AGGAGGTCTT CAAACTCTCC
GACAGGGTAA CCGTTATTGA CCGGGGCCGG ATAATCCGCA CGGGAAGCCC TCTTGAGGTT
TTTCTCGACC GAACCACCTC AAACAAATTT TCATTTGCAA GCACCATCCT GAGTATCCGC
AAGGTTGACT GCATCTACCT TGCCGTTATC GGGGCGGGAA ATGAGCTGGT TGAAGTCGTG
CTGAGCAGGC ATGATTTCGA AACCCTCAAG GTCGGCGACG AGGTTCTTGT CGCCTCAAAA
GCATTCAATC CCCTTGTCAT CAAATTGTAA
 
Protein sequence
MIILSITKTL SGAEGPFELS LDLSLQPETL HTLFGRSGSG KTTTLRILAG LTQPDSGHIE 
VNGRVWLDSA AKINLPPQKR KVGFVFQDYA LFPTMTIKEN LLFAQKTKNE QKVNELLELT
HLSVLHNRYP TKLSGGQQQR VALARAILRE PDILLLDEPL SALDQSTRLR LQDEIMSFHK
RFRLTTVLVS HDKQEVFKLS DRVTVIDRGR IIRTGSPLEV FLDRTTSNKF SFASTILSIR
KVDCIYLAVI GAGNELVEVV LSRHDFETLK VGDEVLVASK AFNPLVIKL