Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0435 |
Symbol | |
ID | 4569224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 482133 |
End bp | 482882 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639765035 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_910917 |
Protein GI | 119356273 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTAT CAGGCAATAA AGTCTGTTTC ATGACGGGCG CGACAGGAGG CCTTGGCAGC GAACTTGCCC TGTCAATCGC AAGACAGGGT TATTCGGTTT TCTTTACCTG GAATGCCTCC CGCCTTAAAG CGGAAAAAAC GTTGGAAAAA ATTCGAAGGA TAAGTCCTGA GTCGGATATG ATCCGGTGCG ATATTGCAAA ACCGAAAGAG ATACAACAGG CTTTTAACGC TTTTCTTGAG AAATTCAGTC GTCTTGACCT TCTTTTGGCA AGCGCTTCGA ATTTTTACAG GACCGGCCTG CCTGATGTGA GTGAGACCGA GTGGGACAAT CTTGTCGATA CCAATCTGAA AGGCACTTTT TTTACGATGC AGGAGGCCGT CAAGATCATG CGAAATCAGT CTTTTGTGTC GAGAATCATT ACCATGACCG ATGTGTCGGC TGATCTTGTG TGGAGACACT TTGCGCCTTA CACGGTTTCA AAGGCTGGTA TCCAGCATCT GGTTAAAATT TTTGCCAGGG AATTTGCACC GCAAGTGCTT GTCAATGCTA TCGCTCCCGG AACAATTACC AGTAACGCAG ATTTGCAGCG TGACGAACAC TCCGTTGAGG AAAAGAAACT GATCGAAAAA ATTCCGCTGC AGCGACTTGG AAACCCCCTT GATATATCGA GGGCCGTTCT TTTTCTTCTT GAAAGCGACT ATATCACCGG ACAAATCATT TCAATCGATG GAGGAAGAGT GCTTGGTTAG
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Protein sequence | MTVSGNKVCF MTGATGGLGS ELALSIARQG YSVFFTWNAS RLKAEKTLEK IRRISPESDM IRCDIAKPKE IQQAFNAFLE KFSRLDLLLA SASNFYRTGL PDVSETEWDN LVDTNLKGTF FTMQEAVKIM RNQSFVSRII TMTDVSADLV WRHFAPYTVS KAGIQHLVKI FAREFAPQVL VNAIAPGTIT SNADLQRDEH SVEEKKLIEK IPLQRLGNPL DISRAVLFLL ESDYITGQII SIDGGRVLG
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