Gene Cpha266_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0426 
Symbol 
ID4570980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp469677 
End bp471635 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content47% 
IMG OID639765025 
ProductFtsH peptidase 
Protein accessionYP_910908 
Protein GI119356264 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.405966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAA ATAAAAAAGA GCGCCCCGTA AAAAAGGATT CATCAAACAA GTTCAAACCG 
GTGAGAAATG ATGATCAACC TCAGGGTTGG CTGCCAGGAA AAACCGGCGG AGGACAGGGC
AAGTTTCCTG TTGTTCTTGT CTTTATGCTG CTCGCTTTTT TGATGCTTTT TCTTTTTCAA
CGTTTTTTTT CCTCTTCCGA CAGTCCCGAG GTAACCTATA ACAGTTATCG CTCGCTGCTT
GTATCGGATC TTGTACGCGA CGTTACGGTA AAGACTTTCA GCGATAAATC AGCAATCATC
AATGGAAAGC TGAAATCGGT TACGAAACTT GAACTGACAA ACAGCATGAC GCTCGAGTCA
GACAGGTTTT CAGTGAGAAT TCCTGCATTC AGTGTTGAAC AGGCAGATCT GCTTGCCGAA
AAAGGAATCC GCGTCAAGGT TGAGGACGGC ACTCCCGCCT TTACCGCGTT TCTCATGCTC
TTTGCCCCAT GGATCATCTT CGGGCTATTG TATTTTTTCA TTTTCAGACG AATGTCTTCG
CAAAACGGGA ATGCGGCAAA AAATATTTTC AGTTTTGGCA AGAGCAGGGC GAAAATGGTA
AGCGAATTCG ATGTCAAAAC CTCATTCAAG GATGTTGCCG GAGTTGATGA AGCGATCGAG
GAGCTCCAGG AAACGGTGGA GTTTCTTACC AACCCGGAAC GGTTCGAGAA AATCGGCGGT
AAAATCCCAA AGGGAGTGCT GCTTCTCGGC CCTCCTGGAA CTGGAAAAAC CCTGCTTGCC
AAAGCAATTG CCGGTGAAGC AAAAGTCCCT TTTTTCTCTA TTTCCGGAGC TGATTTTGTT
GAAATGTTTG TAGGTGTCGG AGCTTCAAGA GTCAGGGATC TGTTTGAACA GGCAAAGAAA
AACGCGCCCT GTATTGTGTT TATTGATGAA ATCGATGCCG TTGGCAGAAG CCGCGGCGCG
GGGGTTGGCG GTGGCCATGA TGAAAGAGAA CAAACGTTGA ACCAGCTCCT GGTGGAGATG
GACGGCTTTA CCACCAGCGA GAATGTCATT CTGATTGCAG CGACAAACCG TCCAGACGTA
CTTGACAGCG CCCTGCTCCG GCCAGGGAGG TTTGACCGTC AGATCACTAT CGATAAACCC
GATATCCGGG GTCGTGAAGC GATTCTGAAA ATCCATACCC GCAAGACGCC GCTTGGCAGT
GATGTTGATC TGACCGTTCT TGCAAAAAGC TCGCCGGGGT TTTCAGGGGC TGACCTTGCC
AACCTTGTTA ACGAAGCGGC ACTGCTTGCA TCAAGAGAGG GCAAGGAGGA AATTACCGCC
CTTGATTTCG AACATGCCCG AGACAAAGTG CTGATGGGGC CTGAAAGAAG AAGCATGTAT
ATTTCTGACG AACAGAAAAA AATGACCGCC TATCATGAAG CGGGACATGT TCTGGTTGCA
AGTTATACCA AAGGATCGGA TCCGATCCAC AAGGTGACCA TCATTCCCAG AGGAAGAAGC
CTTGGTTTGA CAGCCTACCT GCCCCTTGAA GATCGATATA CGCACAACAG AGAGTATCTG
CTTGCCATGA TAACCTATGC TCTTGGGGGA AGGGTTGCCG AAGAACTGGT TTTTAACGAA
ATCAGCACCG GCGCAGCCAA CGATATTGAA AAGGCAAGTG ATATAGCGAG ACGAATGGTG
CGTCAATGGG GCATGAGCGA AAAACTCGGA CCGATCAACT ATGGGGATAG CCAGAAAGAA
GTTTTTCTGG GAAAAGACTA TTCCCACATA CGTGAATACA GCGAGGAAAC CGCACTGCAG
ATCGATGTCG AGGTTCGCAA TATTATCATG TCCTGCATGG ATAATGCCAA AAAAATTCTT
ATCGAGAAAA AATCCATACT TCAGAAACTG GCTGAAACTC TGATTGAAAA AGAATCTCTT
GATGCCGGAG AAATTCGTAA AATCATCGGG AACGACTGA
 
Protein sequence
MPENKKERPV KKDSSNKFKP VRNDDQPQGW LPGKTGGGQG KFPVVLVFML LAFLMLFLFQ 
RFFSSSDSPE VTYNSYRSLL VSDLVRDVTV KTFSDKSAII NGKLKSVTKL ELTNSMTLES
DRFSVRIPAF SVEQADLLAE KGIRVKVEDG TPAFTAFLML FAPWIIFGLL YFFIFRRMSS
QNGNAAKNIF SFGKSRAKMV SEFDVKTSFK DVAGVDEAIE ELQETVEFLT NPERFEKIGG
KIPKGVLLLG PPGTGKTLLA KAIAGEAKVP FFSISGADFV EMFVGVGASR VRDLFEQAKK
NAPCIVFIDE IDAVGRSRGA GVGGGHDERE QTLNQLLVEM DGFTTSENVI LIAATNRPDV
LDSALLRPGR FDRQITIDKP DIRGREAILK IHTRKTPLGS DVDLTVLAKS SPGFSGADLA
NLVNEAALLA SREGKEEITA LDFEHARDKV LMGPERRSMY ISDEQKKMTA YHEAGHVLVA
SYTKGSDPIH KVTIIPRGRS LGLTAYLPLE DRYTHNREYL LAMITYALGG RVAEELVFNE
ISTGAANDIE KASDIARRMV RQWGMSEKLG PINYGDSQKE VFLGKDYSHI REYSEETALQ
IDVEVRNIIM SCMDNAKKIL IEKKSILQKL AETLIEKESL DAGEIRKIIG ND