Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0426 |
Symbol | |
ID | 4570980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 469677 |
End bp | 471635 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639765025 |
Product | FtsH peptidase |
Protein accession | YP_910908 |
Protein GI | 119356264 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.405966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAAA ATAAAAAAGA GCGCCCCGTA AAAAAGGATT CATCAAACAA GTTCAAACCG GTGAGAAATG ATGATCAACC TCAGGGTTGG CTGCCAGGAA AAACCGGCGG AGGACAGGGC AAGTTTCCTG TTGTTCTTGT CTTTATGCTG CTCGCTTTTT TGATGCTTTT TCTTTTTCAA CGTTTTTTTT CCTCTTCCGA CAGTCCCGAG GTAACCTATA ACAGTTATCG CTCGCTGCTT GTATCGGATC TTGTACGCGA CGTTACGGTA AAGACTTTCA GCGATAAATC AGCAATCATC AATGGAAAGC TGAAATCGGT TACGAAACTT GAACTGACAA ACAGCATGAC GCTCGAGTCA GACAGGTTTT CAGTGAGAAT TCCTGCATTC AGTGTTGAAC AGGCAGATCT GCTTGCCGAA AAAGGAATCC GCGTCAAGGT TGAGGACGGC ACTCCCGCCT TTACCGCGTT TCTCATGCTC TTTGCCCCAT GGATCATCTT CGGGCTATTG TATTTTTTCA TTTTCAGACG AATGTCTTCG CAAAACGGGA ATGCGGCAAA AAATATTTTC AGTTTTGGCA AGAGCAGGGC GAAAATGGTA AGCGAATTCG ATGTCAAAAC CTCATTCAAG GATGTTGCCG GAGTTGATGA AGCGATCGAG GAGCTCCAGG AAACGGTGGA GTTTCTTACC AACCCGGAAC GGTTCGAGAA AATCGGCGGT AAAATCCCAA AGGGAGTGCT GCTTCTCGGC CCTCCTGGAA CTGGAAAAAC CCTGCTTGCC AAAGCAATTG CCGGTGAAGC AAAAGTCCCT TTTTTCTCTA TTTCCGGAGC TGATTTTGTT GAAATGTTTG TAGGTGTCGG AGCTTCAAGA GTCAGGGATC TGTTTGAACA GGCAAAGAAA AACGCGCCCT GTATTGTGTT TATTGATGAA ATCGATGCCG TTGGCAGAAG CCGCGGCGCG GGGGTTGGCG GTGGCCATGA TGAAAGAGAA CAAACGTTGA ACCAGCTCCT GGTGGAGATG GACGGCTTTA CCACCAGCGA GAATGTCATT CTGATTGCAG CGACAAACCG TCCAGACGTA CTTGACAGCG CCCTGCTCCG GCCAGGGAGG TTTGACCGTC AGATCACTAT CGATAAACCC GATATCCGGG GTCGTGAAGC GATTCTGAAA ATCCATACCC GCAAGACGCC GCTTGGCAGT GATGTTGATC TGACCGTTCT TGCAAAAAGC TCGCCGGGGT TTTCAGGGGC TGACCTTGCC AACCTTGTTA ACGAAGCGGC ACTGCTTGCA TCAAGAGAGG GCAAGGAGGA AATTACCGCC CTTGATTTCG AACATGCCCG AGACAAAGTG CTGATGGGGC CTGAAAGAAG AAGCATGTAT ATTTCTGACG AACAGAAAAA AATGACCGCC TATCATGAAG CGGGACATGT TCTGGTTGCA AGTTATACCA AAGGATCGGA TCCGATCCAC AAGGTGACCA TCATTCCCAG AGGAAGAAGC CTTGGTTTGA CAGCCTACCT GCCCCTTGAA GATCGATATA CGCACAACAG AGAGTATCTG CTTGCCATGA TAACCTATGC TCTTGGGGGA AGGGTTGCCG AAGAACTGGT TTTTAACGAA ATCAGCACCG GCGCAGCCAA CGATATTGAA AAGGCAAGTG ATATAGCGAG ACGAATGGTG CGTCAATGGG GCATGAGCGA AAAACTCGGA CCGATCAACT ATGGGGATAG CCAGAAAGAA GTTTTTCTGG GAAAAGACTA TTCCCACATA CGTGAATACA GCGAGGAAAC CGCACTGCAG ATCGATGTCG AGGTTCGCAA TATTATCATG TCCTGCATGG ATAATGCCAA AAAAATTCTT ATCGAGAAAA AATCCATACT TCAGAAACTG GCTGAAACTC TGATTGAAAA AGAATCTCTT GATGCCGGAG AAATTCGTAA AATCATCGGG AACGACTGA
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Protein sequence | MPENKKERPV KKDSSNKFKP VRNDDQPQGW LPGKTGGGQG KFPVVLVFML LAFLMLFLFQ RFFSSSDSPE VTYNSYRSLL VSDLVRDVTV KTFSDKSAII NGKLKSVTKL ELTNSMTLES DRFSVRIPAF SVEQADLLAE KGIRVKVEDG TPAFTAFLML FAPWIIFGLL YFFIFRRMSS QNGNAAKNIF SFGKSRAKMV SEFDVKTSFK DVAGVDEAIE ELQETVEFLT NPERFEKIGG KIPKGVLLLG PPGTGKTLLA KAIAGEAKVP FFSISGADFV EMFVGVGASR VRDLFEQAKK NAPCIVFIDE IDAVGRSRGA GVGGGHDERE QTLNQLLVEM DGFTTSENVI LIAATNRPDV LDSALLRPGR FDRQITIDKP DIRGREAILK IHTRKTPLGS DVDLTVLAKS SPGFSGADLA NLVNEAALLA SREGKEEITA LDFEHARDKV LMGPERRSMY ISDEQKKMTA YHEAGHVLVA SYTKGSDPIH KVTIIPRGRS LGLTAYLPLE DRYTHNREYL LAMITYALGG RVAEELVFNE ISTGAANDIE KASDIARRMV RQWGMSEKLG PINYGDSQKE VFLGKDYSHI REYSEETALQ IDVEVRNIIM SCMDNAKKIL IEKKSILQKL AETLIEKESL DAGEIRKIIG ND
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