| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0414 |
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| Symbol | ispH |
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| ID | 4570968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 457509 |
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| End bp | 458495 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639765013 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_910896 |
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| Protein GI | 119356252 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.654531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAATCA ATCTTGACAG AACATCATCC GGTTTCTGCA TCGGCGTACA GGGCACCATC
CATGTTGCCG AAGAAAAACT CAATAATCCG GATAAATTAT TTTCGCTCGG TGATGTTGTG
CATAACGAAG CTGAAGTCAA CAGACTTGAA CATCTCGGCC TGACAACCAT CGATGAGTCA
GGATTTCACG AACTGAAAAA TGCGCAACTC CTCATCAGGG CTCATGGCGA ACCCCCGTCA
ACATACCGTA TTGCAGAGAA AAACAACCTT GTCATTACGG ATACGACCTG CCCTGTAGTC
TCAAGACTGC AACGCACCGC AAGACTGCTC CATGAGCTTG GCTACCAGAT CATCATTTAC
GGGAAGCCCT CCCATCCCGA AGTAATCGGA ATCAATGGCC ATTGCAAAAA CAGTGCGGTC
ATCATCAAAC ACCCCGACCT TTCCGATCCT TCAGAGACCG GTCAAATTGA TCTGAAAAGA
AAAACAGCAC TCATCTCACA AACAACCATG GATGTTCCGG GGTTTTATGA GCTGAAAGCA
AACATCCGTA ACCTCTTTGC TGCCGATTCT GAAGAAATAC GTAACGAGAA CGACCATCTC
TGGATGGCTA TCCGCGACAT TGATCTCACG GCCTCATTGA CCGGCATTCG CGACATGCCG
CGTTACGTTT ACAAAGACAC CATATGTCGG CAGGTTTCGA GCAGAAACCA GATGCTGCAT
GATTTTGCGA TTGCAAACAG TTGCGTCATT TTTGTCGCCG GCAAAAAAAG TTCAAACGGA
CAGGTTCTTT TCGGCATATG CAAAGCCGCA AATCCCTGCA CCTATTTCAT TGAGGATATT
GATGAAATAG ACGATGCATG GCTGACCGGG AGTGATGGCC GGACGGTTGA AAGTGTGGGT
ATCTGCGGAG CCACCTCTAC GCCAATGTGG CTGCTTGAAA AAGTTGCGGC ACACCTCCAG
AGACGATATA ATCACGATCC CGCATGA
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| Protein sequence | MKINLDRTSS GFCIGVQGTI HVAEEKLNNP DKLFSLGDVV HNEAEVNRLE HLGLTTIDES
GFHELKNAQL LIRAHGEPPS TYRIAEKNNL VITDTTCPVV SRLQRTARLL HELGYQIIIY
GKPSHPEVIG INGHCKNSAV IIKHPDLSDP SETGQIDLKR KTALISQTTM DVPGFYELKA
NIRNLFAADS EEIRNENDHL WMAIRDIDLT ASLTGIRDMP RYVYKDTICR QVSSRNQMLH
DFAIANSCVI FVAGKKSSNG QVLFGICKAA NPCTYFIEDI DEIDDAWLTG SDGRTVESVG
ICGATSTPMW LLEKVAAHLQ RRYNHDPA
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