Gene Cpha266_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0353 
Symbol 
ID4569525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp392896 
End bp394815 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content46% 
IMG OID639764951 
ProductABC transporter related 
Protein accessionYP_910836 
Protein GI119356192 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGC TTCTCCGGAT GCTCCGTTAT CTTGCTCCAT CAAAAGGGAA AATTGCCCTT 
GTGGTGGTTG TGAGTATTAT CACATCGTTT TTAAGTGTGA TTTCGATCTA CTCAATACTC
CCTTTGCTTA ATGCCGTTTT TGAAACAGGC CCCGTCACTC GAACGGAAGC TACGCACACG
GAATCTGACG GTAAAAGCAG GCAGGAGGAG TCAATGCAGA AGGCGACTCC CCTTAAACCA
GCTATTGGCA ATGGTTTTGT AAACTTCGAT GAGCTCAAGA AAAACGCCCT GGTGACGTTT
CAGCATGCGT TTCATGCTGA AACGAAGGAG CGCTCTCTTC TTAATATCTG CCTCTTTCTG
ATTGCCGCTT TTGCTGTAAA GAACATCTTT GTCTATCTCA ATGGGCAATT GATTTTTCGT
ATTCAGACAA AAACAGCAAA AAAGCTCAGG GACGATGTGT TTCGCAGCAT CATCGAGATG
CACCTCGATT ACTTTAACAA GAATCGGGTC GGCAATCTTA TGAACTATGT GTATAACGAT
GTCGAGAATG TCAATGCGAG TATCAGTTCT ACCTTGGTCA ATTTTTTGCA GAACCCGTTT
TCCATATTTG TCTATATGGT GGTGCTGTTT GCCCTGAGCT GGCAACTCAC GCTCTTTGCA
GCTTTTACCT CGCTACTCAT ATTTTTTCTT ATCCAGCTGG TCGGTAAAAA TGTCAAGGGT
CTTGCGCTTA CTTTTCAGAC CAGAATGGGT GACATGAATT CCGTGCTGCA GGAGAAATTC
AATGGTATAA AAGTGATCAA GGCAACGGCG TTTGAGGATG TTGAGCTTGA ACGTTTTAAG
GAATTTACCA GGGATTTTCG AACTCTTGGT ATTAAAATCC AGCAGATGCG CAATGTTATC
AGTCCACTGA ATGAGACATT GCTGGTTGCT GCTATTGCGG GGGTTCTCTG GTTTGGGGGG
TTGCAGGTGT TCAAAGGCGT GATGACGGCT AATGAATTGA TTGTATTTGC TTTTACTCTT
TACTCGACGA TGGGTCCGAT AAAGATGCTT GGCAACGCCA ATACCTCAAT CCAGATTGGC
TTGATATCGG TAGAGCGTCT TTTTGAAGTG CTTGATGCTG AAGCTGTGGT GGTGAATGGT
ACCCGCAGTA TAACCGGATT TTCCCACACG ATCAGATTTG AGGATGTGTG TTTCCGGTAT
CTCAAGGAAC CCGATGCACC CAATGTACTC GATCATGTTA CCTTTGAGAT CAAAAAGGGC
GAAATGGTTG CCCTTGTTGG TCAGTCCGGT TCGGGCAAGT CAACTGCCGT TGATCTTCTT
CTGCGGTTTT ACGACGTCGA TTCGGGACGT ATTACCATTG ATGGCGTCGA TATTCGTGAC
TATGATTTCA AGCAGCTTCG CCGGATGATC GGGGTTGTAA GTCAGGAGGT GATTTTGTTT
AATGACTCGA TTGATGCAAA TATCGCCTAT GGCGTTCGTG ATGAGATAGG ACATGGCCGG
GTGGAACAGG CAGCGCGTTT GGCAAATGCC CATCAGTTTA TCAGCGAAAA GCCGGATGGG
TATAATACTC TTATCGGAGA CCGGGGGATC CAGCTTTCAG GAGGTCAGCG ACAGCGGTTG
GCCATTGCCC GTGCGATGGT AAAAAATCCC GAACTTCTGA TTTTTGATGA AGCGACAAGC
GCGCTCGATA ACGAGTCGGA AAAGGTTGTG CAGCAGGCAA TAGATCATGC TCTTGCAAAT
CGTACTGCTC TTGTTGTTGC GCACAGGCTT TCGACAGTCA AGAATGCCGA CAGGATCATT
GTGATGGAAC GTGGCCAGGT AGCCGAGTCA GGCAATCATG AGGAGTTGCT GCAGGCTGAT
GGACTTTACA GGAAGCTCTA TGAGATTCAG TTTGCGGGAA AAACCGAACG AGCTTCATGA
 
Protein sequence
MNLLLRMLRY LAPSKGKIAL VVVVSIITSF LSVISIYSIL PLLNAVFETG PVTRTEATHT 
ESDGKSRQEE SMQKATPLKP AIGNGFVNFD ELKKNALVTF QHAFHAETKE RSLLNICLFL
IAAFAVKNIF VYLNGQLIFR IQTKTAKKLR DDVFRSIIEM HLDYFNKNRV GNLMNYVYND
VENVNASISS TLVNFLQNPF SIFVYMVVLF ALSWQLTLFA AFTSLLIFFL IQLVGKNVKG
LALTFQTRMG DMNSVLQEKF NGIKVIKATA FEDVELERFK EFTRDFRTLG IKIQQMRNVI
SPLNETLLVA AIAGVLWFGG LQVFKGVMTA NELIVFAFTL YSTMGPIKML GNANTSIQIG
LISVERLFEV LDAEAVVVNG TRSITGFSHT IRFEDVCFRY LKEPDAPNVL DHVTFEIKKG
EMVALVGQSG SGKSTAVDLL LRFYDVDSGR ITIDGVDIRD YDFKQLRRMI GVVSQEVILF
NDSIDANIAY GVRDEIGHGR VEQAARLANA HQFISEKPDG YNTLIGDRGI QLSGGQRQRL
AIARAMVKNP ELLIFDEATS ALDNESEKVV QQAIDHALAN RTALVVAHRL STVKNADRII
VMERGQVAES GNHEELLQAD GLYRKLYEIQ FAGKTERAS