| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0343 |
|---|
| Symbol | |
|---|
| ID | 4569515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 376201 |
|---|
| End bp | 376872 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639764941 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_910826 |
|---|
| Protein GI | 119356182 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.202316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCTT TCTTATTCAG CGATCATGAC GACACGCTGC CTTCAGTTCA GTCTGAGGCT
GGAGCTCCAT TCAGAGATCT GATCGGCCTC TCTCTGGCGG TTAAATCGTG CACTAAATGC
CGGCTCTCCG CTTCAAGAAA AAACGTTGTA TTCGGTGAAG GAGATCCCCG CGCCGCCCTT
GTGGTCATCG GAGAAGCACC CGGTGCGGAT GAGGACAGCC AAGGCCGCCC GTTCGTTGGC
AGATCGGGAC AACTGCTCGA CAAGATTCTT CAAGCCGTAC AGTTCAAGCG TGAGGAAGTT
TTTATCTGTA ATATTCTCAA ATGTCGACCA CCTCAAAACC GCAACCCGCT TGCTGATGAA
ATAGAGTGCT GCATGCCATG GCTGCTCCTG CAGCTTGAAC TCCTCAATCC AAAACTGATT
CTGCTGCTCG GCAAAGTCGC AGCCAATACC ATTTTGCAGA ACAGTTTATC GATGGGAGCG
ATGAGAGGAC GAATTGTCAA ATGGAAAGCG TACGACTGTA TGGTTACCTA TCATCCCGCC
GCTCTGTTAA GAAATCCCGG TTGGAAAAAA GCCTGCTGGG AGGATGTTCA GATGATGCGT
CAGCACTATG ATAAACTTTG CTCAGCCGAA GCACATTCAA GAACCATGGT AACAAACAAT
GATCAAGCCT AA
|
|---|
| Protein sequence | MHPFLFSDHD DTLPSVQSEA GAPFRDLIGL SLAVKSCTKC RLSASRKNVV FGEGDPRAAL
VVIGEAPGAD EDSQGRPFVG RSGQLLDKIL QAVQFKREEV FICNILKCRP PQNRNPLADE
IECCMPWLLL QLELLNPKLI LLLGKVAANT ILQNSLSMGA MRGRIVKWKA YDCMVTYHPA
ALLRNPGWKK ACWEDVQMMR QHYDKLCSAE AHSRTMVTNN DQA
|
|---|
| |