| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0301 |
|---|
| Symbol | |
|---|
| ID | 4570791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 333447 |
|---|
| End bp | 335729 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639764900 |
|---|
| Product | 1A family penicillin-binding protein |
|---|
| Protein accession | YP_910787 |
|---|
| Protein GI | 119356143 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACCT TAAGAACGAC TGTTACCGTG AATACTACTT TTTTTAAAAA ATCTTTTATT
ACTCTTGCCG CGCTGGTTTT TTTTCTGCTG ACTTCGGTCA GCGCATTTGC GCTCAATCCT
TTCAAGGGGC TTCCAAGCCT TGAAGAACTT GAAAACCCTA ACCCGGATCT CGCATCACTG
GTCTATTCGG AAGACGGCGT GCTGCTTCAC AAGTTTTTCG TAAAAAACCG CACGTTTATC
CCGCTGAAAT CAATTCCGAG ATCTGCGCGT TATGCTCTTA TAGCCACGGA AGATGTAACG
TTTTATCAGC ACTGGGGTGT TGATCTTCGC CGTCTCGCAC TGGTCATGGG TGAAAATATC
ATCAAGGGAC GCCAGAGATG GCACGGCGCG AGCACGATCA CGCAGCAGCT TGCCAAAAAC
CTCTACCTGA CGCAGGAAAG AACCGTCTCA AGAAAAGTCA AGGAGCTTAT TACCGCTGTT
GAGCTTGAAA AAACCTATAC AAAAGATGAG ATCCTGGCAC TGTATCTCAA CACAGTCTAT
TTCGGTTCCG GAGCCTATGG CATTGAAGCT GCAGCAAGAA CCTATTTCAG CAAACCGGCC
AGCCAACTGA CCCTCCCGGA GAGCGCAACA CTCATTGCAA CCCTGAAAAA CCCTACCGGG
TACAACCCGG TCAAGAATCC ATCCGGAGCC ATCAGCAGAC GGAACCTGAT TCTGTCATTA
ATGGAAAAGG AAAAATTCAT AACCCCGGAG CAGGCCGCTA CGGCAAAAAG AAGCCGGCTT
CTATTGCACT ACACCCCTGT ATCGCACCAT GGAATCGCCC CTTATTTCAC GGAATATATA
CGCCAAACAG TAAAACCAGC CTCAATGCTC GGCGATATCA ATCTGCATCG CGACGGGCTG
ACCATTCAGA CCACGCTTGA CAGTCGCATG CAGAAATATG CTGAACAGGC CGCTGTCGAT
CACCTTGCAT CATTACAGGC ATCCTTCGAT CGATCATGGA GATGGCCGGA ATCGCTTAAA
AACCAGATGA TAAAGGAGAG CCCCAGATTC AAGGAACTTC TGGAGGATGG AGTATCGGCA
CAGCAGGCCC TCGTGCAGCT CAGGGCTGAC AGGATCTGGC TGAATAATCT GTTGCGTGAA
AAAACAAGAA TACAGGTAGC CTTGGTCGCC ATTGACCCTG CAAACGGTCA TATCAAGGCA
TGGGTTGGCG GCAACAGCCT CTCTTCAGAG GACTACAAAT ATCAGTTTGA CCATGTATGG
CAGGCTAAAA GGCAGCCGGG ATCGACCTTT AAACCATTTG TCTACCTGAC GGCAATCGAC
AAGGGAATTC CTGCAAATTT CAGGGTTCTT GACCAGCCGC TGGCTCTTAA AAGCGGCAAT
GGCATCTGGT CGCCAAGAAA CTCGGACGGT TCATCAGGAG GGATGACAAC ACTCCGCTCT
GCGCTGACCC GTTCTCTCAA TCAGGTATCC GTACGACTTG CATATGAGCA GCTTACGGTT
CCGGAAATTA TCAGCTATGC AAAGAGAATG GGCATTTCCT CAGTTATGCC GCAAAACTAT
TCCATCGCGC TTGGAACCGG TGAAGTTAGC CCACTTGAGC TTGCCGGAGC ATTTTCGACT
TTCGCCAACA ATGGCATCTG GACCGAACCG GTTTCGATTC TGAAAGTTTC GGACAAACAT
CACCGATCCA TGTCGGAATC CACACCCAAC AGACGTTTCG CCATTGACTC GACCTCCAAC
TTCGTCATGG TATCAATGAT GCGGGATGTT ATCAACAGAG GAACAGCCTC TTCTATACGA
GGCAGATATG CCATGACAAT GGATGCTGCC GGCAAAACAG GAACCACGCA GAGTCTCAGG
GATGCCTGGT TCGCCGGGTT TACCCCGCAA CTTGTTGCTG TGGTGTGGAC CGGTTTTGAT
GATGAGCGCA TCAAGTTTAC CTCCATGGAG TATGGGCAAG GTGCACGGGC TGCTCTTCCG
ATATGGGCGG GCTTCATGAA ACGGTGCTAC AGCGACCCTT CTCTGAAACT GACAAACAGA
TACTTCCATA TTCCAAACAC GGTTATTGCA GTCCCCATTT CCGGCCAGGC CAGTGTGGCC
TCTGCTCCTG CGAACAACTC GGTGTATATC GAGTACTATA CACCAAAGGG ATTCAACTAT
TACAAGTCAA ACCCTGTCCA GTCAACACCG GGAGACCAGG GAGACAGCGG CGTACCGACT
GAAGGCGATC TCGAACCGGC CCCACAACCG GCAGAGACTC CCGCACAGGA AGGGGCGTTT
TGA
|
|---|
| Protein sequence | MITLRTTVTV NTTFFKKSFI TLAALVFFLL TSVSAFALNP FKGLPSLEEL ENPNPDLASL
VYSEDGVLLH KFFVKNRTFI PLKSIPRSAR YALIATEDVT FYQHWGVDLR RLALVMGENI
IKGRQRWHGA STITQQLAKN LYLTQERTVS RKVKELITAV ELEKTYTKDE ILALYLNTVY
FGSGAYGIEA AARTYFSKPA SQLTLPESAT LIATLKNPTG YNPVKNPSGA ISRRNLILSL
MEKEKFITPE QAATAKRSRL LLHYTPVSHH GIAPYFTEYI RQTVKPASML GDINLHRDGL
TIQTTLDSRM QKYAEQAAVD HLASLQASFD RSWRWPESLK NQMIKESPRF KELLEDGVSA
QQALVQLRAD RIWLNNLLRE KTRIQVALVA IDPANGHIKA WVGGNSLSSE DYKYQFDHVW
QAKRQPGSTF KPFVYLTAID KGIPANFRVL DQPLALKSGN GIWSPRNSDG SSGGMTTLRS
ALTRSLNQVS VRLAYEQLTV PEIISYAKRM GISSVMPQNY SIALGTGEVS PLELAGAFST
FANNGIWTEP VSILKVSDKH HRSMSESTPN RRFAIDSTSN FVMVSMMRDV INRGTASSIR
GRYAMTMDAA GKTGTTQSLR DAWFAGFTPQ LVAVVWTGFD DERIKFTSME YGQGARAALP
IWAGFMKRCY SDPSLKLTNR YFHIPNTVIA VPISGQASVA SAPANNSVYI EYYTPKGFNY
YKSNPVQSTP GDQGDSGVPT EGDLEPAPQP AETPAQEGAF
|
|---|
| |