Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0243 |
Symbol | alaS |
ID | 4570810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 273033 |
End bp | 275699 |
Gene Length | 2667 bp |
Protein Length | 888 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639764847 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_910734 |
Protein GI | 119356090 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAC GAGAAATCAG GCAGTCGTTT TTAGATTTTT TTGATCGTAA GGGTCATACT ATTGTTCGTT CGGCACCGGT TATTCCTCTC GATGATCCTA CGCTGCTCTT TACCAATGCC GGAATGAACC AGTTCAAGGA TGTTTTTCTC GACAAGGGAA CAAGGCCTTA CGTACGCGCT GCCGATACCC AGAAATGCAT CCGCGCCTCC GGAAAGCATA ACGACCTTGA AGATGTAGGA AGAGATACCT ACCATCACAC CTTTTTTGAA ATGCTCGGCA ACTGGTCATT CGGCGACTAT TATAAAAAAG AGGCCATTTC CTGGGCATGG GAGCTCCTGA CATCGGTATG GCATCTCCCG AAGGAACGCC TTTACGCGAC AGTCTATTAT GATGACGAGG AAAGTTATCT CCTCTGGCAG GAGGAGACGG ATATTCCGCA TGATCACATT ATCAAATTCG ATGAAAAAGA CAATTTCTGG GAGATGGGAG AGACCGGCCC TTGCGGACCA TGCTCGGAGA TCCATATCGA CCTTACAGAA GACGGTTCCG GAAAGCCACT GGTCAATGCC GGAGACTATC GTGTAATTGA ACTCTGGAAT CTTGTCTTTA TTCAGTACAA TCGCCAGGCG GATGGACGGC TTGAGCCTCT GCCGCAGAAA CATGTCGATA CCGGCATGGG CTTCGAGCGT GTTTGTGCCG TGATGCAGGG AAAGGCTTCG AACTACGACA CTGATGTATT TCGGCCTCTT TTCGACAGGA TTACCGAAAT TACCGGGGTA AGCTATAACG CTTCGCTTGA TGATCCGTCT GATATTGCCA TGAGGGTGCT TGCCGATCAC GCAAGAACGC TCACCTTTGC TCTTACCGAC GGAGCAATGC CTTCAAACGA GGGGCGAGGA TATGTGCTTC GCAGAATACT GCGTCGAGCT CTTCGCTATT CCAAAACCCT TGGATGCAGC GAGCCGCTGC TTTATCGGCT TGTCGAAACA CTTGCGGCAT CGATGGGCGA CGTGTTTCCT GAGTTACGAA AACAACAGCA AGCCGTTTCA AGAATTATCA GGGCTGAAGA GGAGAGTTTT CTTGCGACGC TCGACCGCGG CATTGAGATT TTCAATGAGC TCATTGCTGC TGTCCGCTCA AGAGGGACAA CGGTTGTCAG TGGCGACGAT GCGTTCAGGC TGTACGATAC ATTCGGGTTT CCGCTTGATC TGACTCGCCT GATGGCTGCG GAAGCCGGCT TCGAAGTCGA TGAAGAGGGA TTTGATCGAT GTATGAAGGA GCAGAAAACC CGTGCGCGTC AGGATCGGAG AGATAAACAG CATCTTAAGG GCGACGAAGG GGAGTGGACA TGGTTTTCCG CGGAAAGAAC TTCGGTATTT ACCGGGTATC ATTCACTTGA AGAGCTTGCT TCCATTACAG GAGTGAGCAT ATTTTCTGAC AGATTGCTTG TGGTGCTTGA CCGCACCCCG TTTTATGCCG AAAGCGGCGG ACAGTGCGGC GACCGCGGAT GGATAGAAAC TGCGGCATAT CGGCTGAGGG TATCCGATAC CCGAAAGGAC GGCGACATGA TTGTTCACCT GGTAACAGAG GTACGCGATT CCGTGAGCGA CGGCGCGATC AGTCCGGCAG ATCTCTCATT TGACGAGGGA AAACTCGCCT GCAGGGCATC GGTTGATCGG TCTGACCGAC AGGGAACCGA GCGGAACCAT ACCGCGACAC ACCTGTTGCA TGCCGCGTTG CGCCGGACCC TCGGTCAGCA TGTACAGCAA AAAGGCTCCT TTGTCAGCTC CGAGCGTCTC CGGTTCGATT TCAGCCATTT CGCCAGGCTT ACTTCTGAGG AGCTTGCGAT CGTCGAATCC GAGGTCAACG AACAGATCCG GAGCGCCGAA CCGGTAGTAA AACATCAGGA CATCCCATAC GACGAAGCGA TCGCCAGAGG CGCGCTTGCT TTTTTCGGCG ACAAATATGC CGACAGGGTA AGGGTTGTTG AGATTGCGGG CCTTTCTGTC GAGCTTTGCG GCGGAACTCA TGTGGACAGT ATCGGCCAGA TCGGTCTGTT CAAGATTGTC AGCGAATCGT CGGTTGCTTC CGGCGTGCGC CGTATCGAGG CATTGACCGG AAAGGCAGCC GAGGTGCTTC TCTGGAAAGA GTACCGCGAA TTGCAGGATA TCCGCCAGAT GCTGAAGCTG AAAGCCGACG AAGAGGTGAT CGGCAGGATC GCCGAACTTG CGGATTCGAA AAAAGAACTT GAAAAACAAT TGCAGGTATA CCGTACCGAG GCCCTTTCCG GAATATTGCA GCGATCTCTC GATGCTGCCG AATCGGTCGG GAGCATCCGT TTCATGACGC TCAGGCTCGA ACACGTCGAT CAGGATTCGC TTCGCCAGGC GGTGCTTGCG CTTCGGGAAA AAGACCCGGC ATCAACGGGA TTGCTTTGTA CGGAAGAGGA TGGAAAAGTC TCCCTTACGG CTTTTGCCGG GGAGAGGGCT GTCGGGGAGT TCGGCCTCGA TGCGGGAAAG CTTGTTCGGG AGGCAGCGGC GTTCGTCCGG GGTGGCGGCG GCGGCAAACC TGAGTTTGCT ACCGCAGGAG GAAAAGATCC CGAAGGCATA CAGAAGGCGT TTGATTCCTT TGCAGCGTCA GTCAGAGAAA AGGTCAGCGC CAAATAA
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Protein sequence | MNSREIRQSF LDFFDRKGHT IVRSAPVIPL DDPTLLFTNA GMNQFKDVFL DKGTRPYVRA ADTQKCIRAS GKHNDLEDVG RDTYHHTFFE MLGNWSFGDY YKKEAISWAW ELLTSVWHLP KERLYATVYY DDEESYLLWQ EETDIPHDHI IKFDEKDNFW EMGETGPCGP CSEIHIDLTE DGSGKPLVNA GDYRVIELWN LVFIQYNRQA DGRLEPLPQK HVDTGMGFER VCAVMQGKAS NYDTDVFRPL FDRITEITGV SYNASLDDPS DIAMRVLADH ARTLTFALTD GAMPSNEGRG YVLRRILRRA LRYSKTLGCS EPLLYRLVET LAASMGDVFP ELRKQQQAVS RIIRAEEESF LATLDRGIEI FNELIAAVRS RGTTVVSGDD AFRLYDTFGF PLDLTRLMAA EAGFEVDEEG FDRCMKEQKT RARQDRRDKQ HLKGDEGEWT WFSAERTSVF TGYHSLEELA SITGVSIFSD RLLVVLDRTP FYAESGGQCG DRGWIETAAY RLRVSDTRKD GDMIVHLVTE VRDSVSDGAI SPADLSFDEG KLACRASVDR SDRQGTERNH TATHLLHAAL RRTLGQHVQQ KGSFVSSERL RFDFSHFARL TSEELAIVES EVNEQIRSAE PVVKHQDIPY DEAIARGALA FFGDKYADRV RVVEIAGLSV ELCGGTHVDS IGQIGLFKIV SESSVASGVR RIEALTGKAA EVLLWKEYRE LQDIRQMLKL KADEEVIGRI AELADSKKEL EKQLQVYRTE ALSGILQRSL DAAESVGSIR FMTLRLEHVD QDSLRQAVLA LREKDPASTG LLCTEEDGKV SLTAFAGERA VGEFGLDAGK LVREAAAFVR GGGGGKPEFA TAGGKDPEGI QKAFDSFAAS VREKVSAK
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