| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0218 |
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| Symbol | dapF |
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| ID | 4570705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 240597 |
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| End bp | 241397 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639764818 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_910709 |
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| Protein GI | 119356065 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGATCA ATTTCAGCAA ACTCTCCGGA GCAGGAAATG ATTTTATCAT TATCGATAAC
AGAGCGCTTG CAATCCATCT TACTCAGCCG CAGATCAATG CCTTGTGTAC TCGAAGAACA
GGTGTTGGTG CAGACGGACT GATTCTTGTT GAACCCTCGT TGCACTGCGA TTTCACCATG
AAATACTTTA ATGCCGACGG ATTTCCCGGA TCAATGTGCG GCAATGGCGG GCGATGTGCT
GTTTATTTTG CCTTTATGCA GGGAGTTACG TCTGCCGAGC CTGAACATTT TTCCTTCGAG
GCAAACAGTA ACCGATATGA CGCAGAGGTA ACGAATTCCG AAACCGTCCG CCTGCACATG
CTGGACGCTC GGGATTTCCG CTACCATATG GAAATTGAAG GATTTGCCTG CACCTTCGTT
AACACTGGGT CTCCTCATGT CGTCATCTTC GCCGACGACA TTAATGCCAT CAATGTTGCT
GAAAAAGGAG TCGCTATCAG ACGCAATACG GATTTTTTCC CGGAAGGTAC AAATGTTAAC
TTCGTCGAAA TAACCTCACC TTCAAGTATC GCTCTCAGAA CTTTTGAACG AGGTGTTGAA
GAGGAAACTC TCGCATGCGG CACCGGCGCA GTCGCTGCTG CGATTATCAG CCGAAAACTT
GGAAAAATCC TGCCAAACTC CGTTAAGGTT ACGGTAAAAA GTGGCGATAT GCTTGAGGTG
AGCTTCAGTG AAAACATGCA GAATATTACG CTGACCGGAC CGGCAAAAAT AGTCTACCAG
GGCTCGGTCA CGATCCCATG A
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| Protein sequence | MQINFSKLSG AGNDFIIIDN RALAIHLTQP QINALCTRRT GVGADGLILV EPSLHCDFTM
KYFNADGFPG SMCGNGGRCA VYFAFMQGVT SAEPEHFSFE ANSNRYDAEV TNSETVRLHM
LDARDFRYHM EIEGFACTFV NTGSPHVVIF ADDINAINVA EKGVAIRRNT DFFPEGTNVN
FVEITSPSSI ALRTFERGVE EETLACGTGA VAAAIISRKL GKILPNSVKV TVKSGDMLEV
SFSENMQNIT LTGPAKIVYQ GSVTIP
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