Gene Cpha266_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0153 
SymboltrmE 
ID4568794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp172835 
End bp174262 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content59% 
IMG OID639764755 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_910647 
Protein GI119356003 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGG AGACCGGCAT CCACCCGATA GTTCAGTGCG ACCCCATTGC CGCCATTGCC 
ACCCCTCTCG GCGTTGGCGC TCTTGCCGTT GTGCGTATCA GCGGCGCAAC GGCCTTCGAT
ATTGCAGGTC GTGTTTTCAG AAAAGCCCGC GATCCGCACC AGCCCCTCTC CGAAACGCCC
GGATATACCG CTCATTTCGG CAGGTTGTAC GACGGCCTGA CGCTGATCGA CGAGGTGATC
GCGCTGGTGT TCCGTTCTCC CTCCTCCTTT ACGGCCGAGG ATATGGTCGA ATTCACCTGC
CATGGAGGCC CGGTTGTAAC CCGGCATGTT CTCCAGCTTC TGCTTGACAA CGGATGCCGA
CTGGCGGAAC CCGGAGAGTT CACCCGCAGA GCCTTTCTCA ACGGCAAGAT CGATCTTCTC
CAGGCCGAGG CTATCGGAGA GATGATTCAC GCCCGTTCGG AATCGGCATA CCGCACCGCC
GTTATCCAGA TGAAGGGCGA TCTGTCGGCA ACCCTCGGAG CCCTGCGCGA AAAGCTGCTC
CGCTCCTGCG CCCTTCTTGA GCTCGAACTG GATTTCAGCG AAGAGGATGT CGAGTTCCAG
AGCCGCGAAG AGCTGAGGGT TGAGATTGCC TCATTGCAGA GCGAGGTTGC CAGGCTTGTT
GATTCCTACC AGCACGGCAG GCTGCTCACC GAAGGCGTGG CCACGGTGAT CGCCGGCAGG
CCGAATGCCG GAAAGTCAAC GCTGCTCAAC ACCCTGCTCG GCGAAGAGCG GGCCATCGTG
AGCCACATGC CCGGCACCAC GCGTGACTAT ATCGAAGAGT GCTTTATTCA CGATAAAACC
ATGTTCCGCC TTACCGATAC CGCGGGTTTG CGTGAAACCG GGGAGGAGAT CGAGCACGAA
GGCGTTCGCC GCAGCCGGAT GAAAATGGCC GAAGCCGATC TGCTGCTCTA TCTCCTTGAT
CTCAGCCGGG AGGGCATGGC AGAGGAGATC AAGGAGATCG TCGCTTTGAA AGCAGCCCAT
GCGTCCTCGA AATTTCTGGT GGTCGCCAAC AAGATCGACC TTGTGCCCGA CGCGACAACC
CTGCTTTGCA GGCTCGGCGA GGAGGCCGGC TGCGAGGCGA TCGGTATTTC AGCGAGGCAG
AAGCTCGGCA TTGACGAGCT GAAAAGCCGT ATGAGCAGTA TGGTTGAGGG GCTCGACAAG
CTGCACGAAG CAAGCGTGCT CGTAACCAGC CTTCGCCACT ACGAAGCGCT GCGCAACGCC
GGCGATGCGC TCCGAAACGC GCAGAATCTC CTGGACGAAC AGGCGGATAC CGAGCTGATC
GCCTTCGAAC TGCGCGCAGC ACTCGACTAT GTTGGCGAGA TCACCGGAAA GGTGGTCAAT
GAAGAGATTC TTCATGCGAT TTTCGAGCGG TTCTGCATCG GCAAGTAA
 
Protein sequence
MQQETGIHPI VQCDPIAAIA TPLGVGALAV VRISGATAFD IAGRVFRKAR DPHQPLSETP 
GYTAHFGRLY DGLTLIDEVI ALVFRSPSSF TAEDMVEFTC HGGPVVTRHV LQLLLDNGCR
LAEPGEFTRR AFLNGKIDLL QAEAIGEMIH ARSESAYRTA VIQMKGDLSA TLGALREKLL
RSCALLELEL DFSEEDVEFQ SREELRVEIA SLQSEVARLV DSYQHGRLLT EGVATVIAGR
PNAGKSTLLN TLLGEERAIV SHMPGTTRDY IEECFIHDKT MFRLTDTAGL RETGEEIEHE
GVRRSRMKMA EADLLLYLLD LSREGMAEEI KEIVALKAAH ASSKFLVVAN KIDLVPDATT
LLCRLGEEAG CEAIGISARQ KLGIDELKSR MSSMVEGLDK LHEASVLVTS LRHYEALRNA
GDALRNAQNL LDEQADTELI AFELRAALDY VGEITGKVVN EEILHAIFER FCIGK