Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0153 |
Symbol | trmE |
ID | 4568794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 172835 |
End bp | 174262 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639764755 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_910647 |
Protein GI | 119356003 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCAGG AGACCGGCAT CCACCCGATA GTTCAGTGCG ACCCCATTGC CGCCATTGCC ACCCCTCTCG GCGTTGGCGC TCTTGCCGTT GTGCGTATCA GCGGCGCAAC GGCCTTCGAT ATTGCAGGTC GTGTTTTCAG AAAAGCCCGC GATCCGCACC AGCCCCTCTC CGAAACGCCC GGATATACCG CTCATTTCGG CAGGTTGTAC GACGGCCTGA CGCTGATCGA CGAGGTGATC GCGCTGGTGT TCCGTTCTCC CTCCTCCTTT ACGGCCGAGG ATATGGTCGA ATTCACCTGC CATGGAGGCC CGGTTGTAAC CCGGCATGTT CTCCAGCTTC TGCTTGACAA CGGATGCCGA CTGGCGGAAC CCGGAGAGTT CACCCGCAGA GCCTTTCTCA ACGGCAAGAT CGATCTTCTC CAGGCCGAGG CTATCGGAGA GATGATTCAC GCCCGTTCGG AATCGGCATA CCGCACCGCC GTTATCCAGA TGAAGGGCGA TCTGTCGGCA ACCCTCGGAG CCCTGCGCGA AAAGCTGCTC CGCTCCTGCG CCCTTCTTGA GCTCGAACTG GATTTCAGCG AAGAGGATGT CGAGTTCCAG AGCCGCGAAG AGCTGAGGGT TGAGATTGCC TCATTGCAGA GCGAGGTTGC CAGGCTTGTT GATTCCTACC AGCACGGCAG GCTGCTCACC GAAGGCGTGG CCACGGTGAT CGCCGGCAGG CCGAATGCCG GAAAGTCAAC GCTGCTCAAC ACCCTGCTCG GCGAAGAGCG GGCCATCGTG AGCCACATGC CCGGCACCAC GCGTGACTAT ATCGAAGAGT GCTTTATTCA CGATAAAACC ATGTTCCGCC TTACCGATAC CGCGGGTTTG CGTGAAACCG GGGAGGAGAT CGAGCACGAA GGCGTTCGCC GCAGCCGGAT GAAAATGGCC GAAGCCGATC TGCTGCTCTA TCTCCTTGAT CTCAGCCGGG AGGGCATGGC AGAGGAGATC AAGGAGATCG TCGCTTTGAA AGCAGCCCAT GCGTCCTCGA AATTTCTGGT GGTCGCCAAC AAGATCGACC TTGTGCCCGA CGCGACAACC CTGCTTTGCA GGCTCGGCGA GGAGGCCGGC TGCGAGGCGA TCGGTATTTC AGCGAGGCAG AAGCTCGGCA TTGACGAGCT GAAAAGCCGT ATGAGCAGTA TGGTTGAGGG GCTCGACAAG CTGCACGAAG CAAGCGTGCT CGTAACCAGC CTTCGCCACT ACGAAGCGCT GCGCAACGCC GGCGATGCGC TCCGAAACGC GCAGAATCTC CTGGACGAAC AGGCGGATAC CGAGCTGATC GCCTTCGAAC TGCGCGCAGC ACTCGACTAT GTTGGCGAGA TCACCGGAAA GGTGGTCAAT GAAGAGATTC TTCATGCGAT TTTCGAGCGG TTCTGCATCG GCAAGTAA
|
Protein sequence | MQQETGIHPI VQCDPIAAIA TPLGVGALAV VRISGATAFD IAGRVFRKAR DPHQPLSETP GYTAHFGRLY DGLTLIDEVI ALVFRSPSSF TAEDMVEFTC HGGPVVTRHV LQLLLDNGCR LAEPGEFTRR AFLNGKIDLL QAEAIGEMIH ARSESAYRTA VIQMKGDLSA TLGALREKLL RSCALLELEL DFSEEDVEFQ SREELRVEIA SLQSEVARLV DSYQHGRLLT EGVATVIAGR PNAGKSTLLN TLLGEERAIV SHMPGTTRDY IEECFIHDKT MFRLTDTAGL RETGEEIEHE GVRRSRMKMA EADLLLYLLD LSREGMAEEI KEIVALKAAH ASSKFLVVAN KIDLVPDATT LLCRLGEEAG CEAIGISARQ KLGIDELKSR MSSMVEGLDK LHEASVLVTS LRHYEALRNA GDALRNAQNL LDEQADTELI AFELRAALDY VGEITGKVVN EEILHAIFER FCIGK
|
| |