Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0094 |
Symbol | |
ID | 4570661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 109147 |
End bp | 110133 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639764696 |
Product | secretion protein HlyD family protein |
Protein accession | YP_910588 |
Protein GI | 119355944 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAC AGGAAAAGAA CATCGGAACC GCAGAAAAAC CGGAAGAAAA AGCAACCAAC CCGCTGCGTC TTGTCATCAC AGTCCTGCTC GTTCTGGCTG CGGTCGTCTG GGGAGGAAGC AAAATCCGGC ACTCTTTCCT CTACGTCGAA ACCGATAACG CCCAGATCGA AGGGGACGTC TACCCTGTCA TCTCAAAGGT GCCGGGAACA GTACAGAGCG TCCTTGTAAG AACAAATCAG GAGGTGCGGA GAGGCGATAC CCTTGTGCTG CTTGATCCGG CGGATTACAA AGTCAAACGG GATATGGCTG AAGCCGCACT GCAGAATGCC CGCGCATCTG TTTCAGCTGC TGGCGAAGCC GCAACAGCAG CCGCGGCAAC CGGCCAGAAG CTCAAATCCG ATCTCGCTCG AAGTCAGAAC CTTCGTCGCC AGGATGTTAT TTCGCCCTCG GAATTTGACG CCGTAAAAGC CGCTGCTCTC TCTTCATCGG CACAATCTGC CGCAGCGGAA AGCCAGCACC GAGGCGCCGC TGCGCAGGTA ACCATGCGCC AGGCCGAACT GCGCAACGCC GACCTGCAGC TCTCCTATAC CACGATCACC GCCCCTGCAG CGGGACATGT GTCGAAAAAG AATGTGCAGC CAGGACAATA TGTAGCACCC GGCCAGCAGC TCATCGCGCT GGTCGGCAGC AGCGAACTCT GGGTTGTAGC GAACTTCAAG GAAACGCAGC TCGAAAACAT CCGTACCGGC CAACCTGTCA CCATCAGGGT GGATGCCTAT CCGGGAAAAG AGTTTGAAGG CCGGGTGGAA TCGATCTCCT CGGGAACCGG AGCGCGCTTC GCCCTGCTTC CTCCCGACAA TGCCAGCGGC AACTTCGTCA AGGTAGCCCA GCGCGTTCCG GTCAAGATTC TGTTTACCGG CAAACCCGAC AAGGATCACA AACTTGCCGC AGGCATGAAC GTTGTTGTTG AGATAAAAGT AAAGTGA
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Protein sequence | MAEQEKNIGT AEKPEEKATN PLRLVITVLL VLAAVVWGGS KIRHSFLYVE TDNAQIEGDV YPVISKVPGT VQSVLVRTNQ EVRRGDTLVL LDPADYKVKR DMAEAALQNA RASVSAAGEA ATAAAATGQK LKSDLARSQN LRRQDVISPS EFDAVKAAAL SSSAQSAAAE SQHRGAAAQV TMRQAELRNA DLQLSYTTIT APAAGHVSKK NVQPGQYVAP GQQLIALVGS SELWVVANFK ETQLENIRTG QPVTIRVDAY PGKEFEGRVE SISSGTGARF ALLPPDNASG NFVKVAQRVP VKILFTGKPD KDHKLAAGMN VVVEIKVK
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