Gene Cpha266_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0094 
Symbol 
ID4570661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp109147 
End bp110133 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content57% 
IMG OID639764696 
Productsecretion protein HlyD family protein 
Protein accessionYP_910588 
Protein GI119355944 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAC AGGAAAAGAA CATCGGAACC GCAGAAAAAC CGGAAGAAAA AGCAACCAAC 
CCGCTGCGTC TTGTCATCAC AGTCCTGCTC GTTCTGGCTG CGGTCGTCTG GGGAGGAAGC
AAAATCCGGC ACTCTTTCCT CTACGTCGAA ACCGATAACG CCCAGATCGA AGGGGACGTC
TACCCTGTCA TCTCAAAGGT GCCGGGAACA GTACAGAGCG TCCTTGTAAG AACAAATCAG
GAGGTGCGGA GAGGCGATAC CCTTGTGCTG CTTGATCCGG CGGATTACAA AGTCAAACGG
GATATGGCTG AAGCCGCACT GCAGAATGCC CGCGCATCTG TTTCAGCTGC TGGCGAAGCC
GCAACAGCAG CCGCGGCAAC CGGCCAGAAG CTCAAATCCG ATCTCGCTCG AAGTCAGAAC
CTTCGTCGCC AGGATGTTAT TTCGCCCTCG GAATTTGACG CCGTAAAAGC CGCTGCTCTC
TCTTCATCGG CACAATCTGC CGCAGCGGAA AGCCAGCACC GAGGCGCCGC TGCGCAGGTA
ACCATGCGCC AGGCCGAACT GCGCAACGCC GACCTGCAGC TCTCCTATAC CACGATCACC
GCCCCTGCAG CGGGACATGT GTCGAAAAAG AATGTGCAGC CAGGACAATA TGTAGCACCC
GGCCAGCAGC TCATCGCGCT GGTCGGCAGC AGCGAACTCT GGGTTGTAGC GAACTTCAAG
GAAACGCAGC TCGAAAACAT CCGTACCGGC CAACCTGTCA CCATCAGGGT GGATGCCTAT
CCGGGAAAAG AGTTTGAAGG CCGGGTGGAA TCGATCTCCT CGGGAACCGG AGCGCGCTTC
GCCCTGCTTC CTCCCGACAA TGCCAGCGGC AACTTCGTCA AGGTAGCCCA GCGCGTTCCG
GTCAAGATTC TGTTTACCGG CAAACCCGAC AAGGATCACA AACTTGCCGC AGGCATGAAC
GTTGTTGTTG AGATAAAAGT AAAGTGA
 
Protein sequence
MAEQEKNIGT AEKPEEKATN PLRLVITVLL VLAAVVWGGS KIRHSFLYVE TDNAQIEGDV 
YPVISKVPGT VQSVLVRTNQ EVRRGDTLVL LDPADYKVKR DMAEAALQNA RASVSAAGEA
ATAAAATGQK LKSDLARSQN LRRQDVISPS EFDAVKAAAL SSSAQSAAAE SQHRGAAAQV
TMRQAELRNA DLQLSYTTIT APAAGHVSKK NVQPGQYVAP GQQLIALVGS SELWVVANFK
ETQLENIRTG QPVTIRVDAY PGKEFEGRVE SISSGTGARF ALLPPDNASG NFVKVAQRVP
VKILFTGKPD KDHKLAAGMN VVVEIKVK