| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0093 |
|---|
| Symbol | |
|---|
| ID | 4570660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 107423 |
|---|
| End bp | 108994 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639764695 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_910587 |
|---|
| Protein GI | 119355943 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGG CGGCACATGC CTATGAAACA GGCTCGCGAA GGATCATCAT CACCCTGACC
GTGATTGTCT CCGCGATGCT TGAACTGATC GACACCACCA TTGTCAACGT AGCCATCACA
GAAATCAGCG GAAACCTCGG AGCAAGCATC GAGGATGTCG CCTGGGTGGT CACCAGCTAC
GCCATCGCAA ACGTCATCGT TATTCCGCTT TCGGGGTTTC TCGGCAACCT GCTCGGACGC
CGGAACTACT ACATCGGCTC GATTCTGCTC TTCACGGCGG CATCGCTGCT CTGCGGCATC
GCAACCGACA TCTGGACGCT GGTCTTTTTC CGTTTTCTGC AAGGAATCGG AGGCGGAGCG
CTGCTGCCGA CCTCCCAGGC AATCCTTTAC GAAACCTATC CACCCGAAGA CCGGGGGAAA
GCAACCGGTA TTTTTTCCAT GGGCCTCGTG CTCGGACCTA CTTTCGGTCC GCTGCTCGGC
GGATTTCTGG TTGACAACTT CAGCTGGGAG TGGTGTTTTT TCGTAAACAT ACCGGTAGGC
CTGCTTGCAG CATGGTCAGC GTTCACCTTC ATCAAGGAGC CGAAAACCGT TCATAAGGTT
GTAAAAATCG ACTGGGCCGG CATCGGCCTT CTCACGATTG GTATCGGCTC GCTGCAGTTC
ATCCTCGAAC GCGGCGAATC GAAAGACTGG TTCGAAACCC CTTACATCAC CTGGTTCACC
ATCATAGCCA TCGTCTCGCT TATGCTCTTT GTCTGGTGGG AGCTGCGTGT AGAGGAACCT
GCCGTTGACC TCAGCGTGCT TGCCCGAAGC CATAATCTTG CCATTGCCGC CGTCCTGACC
TTTGTGGTTG GTTATGGACT CTACGGATCG CTCTTTGTCT TTCCGGTCTT CGTCCAGCGC
CTGCTCGGCT TCTCGGCGCT TCTCACCGGC ACGGTGCTCT TTCCAAGTGC GCTTGTCACA
GGAATCATCG CGCTTCCTCT CGGGATCGCG CTGCAAAAAG GGGCCTCGGC GAAAATTCTC
ATGACCGTCG GCATGGCGGC ATTTTCGATC TTCTGCTGGG AACTTGGCCA GCAGACCATG
CAGTCGGGAG CCGGAAACTT TTTCTGGATA CTGCTCCTGC GCGGCGTCGC CCTCGGATTC
ATCTTCATAC CCGTTACCAT GCTTGCCGTT GCCGGACTGC ACGGCAAGGA TATCGGGCAG
GCAACCGGCC TGAACAACAT GGTACGACAG CTCGGAGGAT CGTTCGGCAT TGCGCTAACC
AACACCTATA TCGTCAAGCG GGTCGCCGAA CACCGTAACG AAATCCTCAG CAACCTCTCG
CCCTACGACC CCGCGGCCGT CGAACGCCTC AACGCCATAG GGCAAGCCGC ACAGTCGCGC
ATGATCTCTC CGGTTGAAGC AGAGCAGGTC GCACTGCGTG CGCTCGAAGG AACGGTCACC
GCACAGAGCT ACCATCTTGC CTACATGGAC GCCTTCATGC TGATCGCCCT GCTCTTTGCG
CTCTGCATGC CGCTGCTCTT CTTCATCAGA ATTAAAAAAG GGGAAAAAGC CGACCTCTCA
CAGGCGCACT GA
|
|---|
| Protein sequence | MLPAAHAYET GSRRIIITLT VIVSAMLELI DTTIVNVAIT EISGNLGASI EDVAWVVTSY
AIANVIVIPL SGFLGNLLGR RNYYIGSILL FTAASLLCGI ATDIWTLVFF RFLQGIGGGA
LLPTSQAILY ETYPPEDRGK ATGIFSMGLV LGPTFGPLLG GFLVDNFSWE WCFFVNIPVG
LLAAWSAFTF IKEPKTVHKV VKIDWAGIGL LTIGIGSLQF ILERGESKDW FETPYITWFT
IIAIVSLMLF VWWELRVEEP AVDLSVLARS HNLAIAAVLT FVVGYGLYGS LFVFPVFVQR
LLGFSALLTG TVLFPSALVT GIIALPLGIA LQKGASAKIL MTVGMAAFSI FCWELGQQTM
QSGAGNFFWI LLLRGVALGF IFIPVTMLAV AGLHGKDIGQ ATGLNNMVRQ LGGSFGIALT
NTYIVKRVAE HRNEILSNLS PYDPAAVERL NAIGQAAQSR MISPVEAEQV ALRALEGTVT
AQSYHLAYMD AFMLIALLFA LCMPLLFFIR IKKGEKADLS QAH
|
|---|
| |