Gene Cpha266_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0093 
Symbol 
ID4570660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp107423 
End bp108994 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content57% 
IMG OID639764695 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_910587 
Protein GI119355943 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCGG CGGCACATGC CTATGAAACA GGCTCGCGAA GGATCATCAT CACCCTGACC 
GTGATTGTCT CCGCGATGCT TGAACTGATC GACACCACCA TTGTCAACGT AGCCATCACA
GAAATCAGCG GAAACCTCGG AGCAAGCATC GAGGATGTCG CCTGGGTGGT CACCAGCTAC
GCCATCGCAA ACGTCATCGT TATTCCGCTT TCGGGGTTTC TCGGCAACCT GCTCGGACGC
CGGAACTACT ACATCGGCTC GATTCTGCTC TTCACGGCGG CATCGCTGCT CTGCGGCATC
GCAACCGACA TCTGGACGCT GGTCTTTTTC CGTTTTCTGC AAGGAATCGG AGGCGGAGCG
CTGCTGCCGA CCTCCCAGGC AATCCTTTAC GAAACCTATC CACCCGAAGA CCGGGGGAAA
GCAACCGGTA TTTTTTCCAT GGGCCTCGTG CTCGGACCTA CTTTCGGTCC GCTGCTCGGC
GGATTTCTGG TTGACAACTT CAGCTGGGAG TGGTGTTTTT TCGTAAACAT ACCGGTAGGC
CTGCTTGCAG CATGGTCAGC GTTCACCTTC ATCAAGGAGC CGAAAACCGT TCATAAGGTT
GTAAAAATCG ACTGGGCCGG CATCGGCCTT CTCACGATTG GTATCGGCTC GCTGCAGTTC
ATCCTCGAAC GCGGCGAATC GAAAGACTGG TTCGAAACCC CTTACATCAC CTGGTTCACC
ATCATAGCCA TCGTCTCGCT TATGCTCTTT GTCTGGTGGG AGCTGCGTGT AGAGGAACCT
GCCGTTGACC TCAGCGTGCT TGCCCGAAGC CATAATCTTG CCATTGCCGC CGTCCTGACC
TTTGTGGTTG GTTATGGACT CTACGGATCG CTCTTTGTCT TTCCGGTCTT CGTCCAGCGC
CTGCTCGGCT TCTCGGCGCT TCTCACCGGC ACGGTGCTCT TTCCAAGTGC GCTTGTCACA
GGAATCATCG CGCTTCCTCT CGGGATCGCG CTGCAAAAAG GGGCCTCGGC GAAAATTCTC
ATGACCGTCG GCATGGCGGC ATTTTCGATC TTCTGCTGGG AACTTGGCCA GCAGACCATG
CAGTCGGGAG CCGGAAACTT TTTCTGGATA CTGCTCCTGC GCGGCGTCGC CCTCGGATTC
ATCTTCATAC CCGTTACCAT GCTTGCCGTT GCCGGACTGC ACGGCAAGGA TATCGGGCAG
GCAACCGGCC TGAACAACAT GGTACGACAG CTCGGAGGAT CGTTCGGCAT TGCGCTAACC
AACACCTATA TCGTCAAGCG GGTCGCCGAA CACCGTAACG AAATCCTCAG CAACCTCTCG
CCCTACGACC CCGCGGCCGT CGAACGCCTC AACGCCATAG GGCAAGCCGC ACAGTCGCGC
ATGATCTCTC CGGTTGAAGC AGAGCAGGTC GCACTGCGTG CGCTCGAAGG AACGGTCACC
GCACAGAGCT ACCATCTTGC CTACATGGAC GCCTTCATGC TGATCGCCCT GCTCTTTGCG
CTCTGCATGC CGCTGCTCTT CTTCATCAGA ATTAAAAAAG GGGAAAAAGC CGACCTCTCA
CAGGCGCACT GA
 
Protein sequence
MLPAAHAYET GSRRIIITLT VIVSAMLELI DTTIVNVAIT EISGNLGASI EDVAWVVTSY 
AIANVIVIPL SGFLGNLLGR RNYYIGSILL FTAASLLCGI ATDIWTLVFF RFLQGIGGGA
LLPTSQAILY ETYPPEDRGK ATGIFSMGLV LGPTFGPLLG GFLVDNFSWE WCFFVNIPVG
LLAAWSAFTF IKEPKTVHKV VKIDWAGIGL LTIGIGSLQF ILERGESKDW FETPYITWFT
IIAIVSLMLF VWWELRVEEP AVDLSVLARS HNLAIAAVLT FVVGYGLYGS LFVFPVFVQR
LLGFSALLTG TVLFPSALVT GIIALPLGIA LQKGASAKIL MTVGMAAFSI FCWELGQQTM
QSGAGNFFWI LLLRGVALGF IFIPVTMLAV AGLHGKDIGQ ATGLNNMVRQ LGGSFGIALT
NTYIVKRVAE HRNEILSNLS PYDPAAVERL NAIGQAAQSR MISPVEAEQV ALRALEGTVT
AQSYHLAYMD AFMLIALLFA LCMPLLFFIR IKKGEKADLS QAH