| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0087 |
|---|
| Symbol | |
|---|
| ID | 4570654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 103347 |
|---|
| End bp | 104657 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639764689 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_910581 |
|---|
| Protein GI | 119355937 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG CTGACGAATC GATAAACGGA AACGACAATT CCCCCGCAGA ACAGAGCCCG
ACAACCCTTA AAGAGAAGGT TCTGTCGGCT TTTCCCGCAT TTCGGAGCCG AAATTTCAGA
CTTTATTTTA TCGGGCAGAT CGTTTCTATG GTCGGCACCT GGCTGCAGAT GGTGGCGCAG
GGCTGGCTTG TGCTTGAAAT GACCGGTTCG GCTTTCTGGG TGGGAGTGGC TGCAGCAGCA
TCCTCGCTTC CGACCCTGTT TCTTTCGCTT ATCGGCGGCG TTATTGTTGA CCGGTACAAC
AGGAAAACCA TTCTGCTCTG GACGCAGTCG GCTTCGATGG TGCTGGCGCT TGTGCTTGGT
ATCATTACCC TTACCGGGTC GGTGACGCTT GCCGTTATTC TTGCGCTGGC GTTTCTTCTC
GGCTGTGTTG CTGCGGTTGC GACACCTGCG ATTCAGGCAT TCCTGAGCGA AATGGTGGAT
CGCGACCAGC TCCATTCCGC TGTAGCGCTC AATGCGGCTA TTTTCAATGC GTCGAGGGTT
ATCGGTCCGG CCATTGCAGG GCTTATGATT GCATGGATCG GCACAGGTGG CGCATTCATC
GCCAACGGGT TGAGTTATTT TGCTGTGATT GCCGCGCTGC TTGCCATAAC TATCGCAACT
CCCCGCAAGA TACCTGCGGT GCATCAGCCT CCCTTGCAGT CGATCAGGGA CGGCATTGTC
TATACGTGGG AGCACCCGGT CATCAGGACT ATCGTGATGT TCGTATCGGT GGTTTCGATA
TTCGGATGGT CGTTCATGTC GATGCTGCCG GTGGTGGCCA AGCAGACTTA CGGTCTCGGT
TCAGATGGCA TGGGTTACCT TTTTTCCGCA TTCGGACTTG GCTCCCTCTC AGGCACCGTG
GTGGTCTCCA TGTCGTCGGG AAAGATCCGC AGCAGCGCCA TGGTGATCGG CGGTATCCTT
GTTTTTTCTC TTGCTCTCAC GGCATTCACC TTTGCCTCGG ACGAACGTGT TGCGATGGCA
TTTCTCTTTA TTGCAGGGAT CGGCATGCTT TCGGCTTTCG CCACCATGAC CGCTACGGTG
CAGCGCCTCG TTGAGGACAG CTATCGTGGC CGGGTGATGA GCATTTACCT GATGGTGCTG
ATGGGGTTTA TGCCGCTGGG CAACCTGCAG GTCGGGTTTC TTTCGGAGCA GTTCGGTACG
GCTATTGCCA TAAGGATTGG CAGTATCGTC GTGCTGCTGG CAACCATTTT TCTTTTCAGC
TATCGCAAAG AGATTCAGTC GGCCTGGCAT GAGTACCGGA TGCAGGAGTA G
|
|---|
| Protein sequence | MSNADESING NDNSPAEQSP TTLKEKVLSA FPAFRSRNFR LYFIGQIVSM VGTWLQMVAQ
GWLVLEMTGS AFWVGVAAAA SSLPTLFLSL IGGVIVDRYN RKTILLWTQS ASMVLALVLG
IITLTGSVTL AVILALAFLL GCVAAVATPA IQAFLSEMVD RDQLHSAVAL NAAIFNASRV
IGPAIAGLMI AWIGTGGAFI ANGLSYFAVI AALLAITIAT PRKIPAVHQP PLQSIRDGIV
YTWEHPVIRT IVMFVSVVSI FGWSFMSMLP VVAKQTYGLG SDGMGYLFSA FGLGSLSGTV
VVSMSSGKIR SSAMVIGGIL VFSLALTAFT FASDERVAMA FLFIAGIGML SAFATMTATV
QRLVEDSYRG RVMSIYLMVL MGFMPLGNLQ VGFLSEQFGT AIAIRIGSIV VLLATIFLFS
YRKEIQSAWH EYRMQE
|
|---|
| |