| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0053 |
|---|
| Symbol | |
|---|
| ID | 4571245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 55586 |
|---|
| End bp | 57445 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639764655 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_910547 |
|---|
| Protein GI | 119355903 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAACTG ATTCACTCAA CCCCGAAAAA AAGCGGGGCT GCTCTGATGC GGCGTTGTAC
GAGACCCTTC GAAAGGTTTT CGGATTCCGT GATTTTCGAC CCAACCAGGA GATGATTGTC
AGGACAATTA TCGAAAAAAG GGATGTTTTT GCCGTCATGC CGACCGGGGG AGGAAAATCG
CTCTGCTATC AACTTCCTGC CGTCCTTCTC CCTGGCACCT GCATGGTGAT CAGCCCGCTT
ATTGCGCTTA TGAAAGATCA GGTTGACGGC GCCAGGGCAA ACGGAATACG TGCGGCCTTT
CTCAACAGCT CGCTTGCTCC TGAAGAGCGC ACTCTTGTTC TGCGCGATCT GCTTTCAAAC
TCACTCGATC TGCTCTATGT CGCGCCTGAA CGGTTTACGC TCGACCAGTT CCAGGAGATG
CTCAAAAGGG TCAATATCAG TATGGCCGTG ATCGACGAAG CGCACTGCAT ATCGGAATGG
GGCCACGATT TCCGGCCCGA CTATCTTTCG CTCTCGCAAC TCGTGACGCT CTTTCCCGAT
CTTCCTGTTG CGGCGTTTAC GGCAACCGCA ACCCACCAGG TGCAACGGGA TATTCTCGAT
AAACTCGCCC TGCGCAACCC GTTTGTCGTA AGAGCATCGT TTGACCGCGC CAATCTCTAC
TACGACATCC GTTTCAAGGA AAATGCCAGC GATCAGCTTG TCGCCCTACT GAAACAAAAC
TCAGGGAAAG CCGGCATCAT CTATCGCACC AGCCGCAAAA GCGTCAACGA GACCGCCGCG
CTGCTGAAGG CAAAGGGGTT TCGGGTGCTC CCGTACCATG CCGGACTTGG CGATGATGAG
CGGAAACAGA ATCAGGAAGC TTTCATTCGC GATGAGGTTG ATGTGATTGT GGCAACCGTT
GCGTTCGGCA TGGGTATCGA CAAATCGAAT ATCCGCTTCG TCATTCATGC CGACCTTCCG
AAAAGCATCG AAAACTACTA CCAGGAAACC GGGCGAGCGG GGCGCGACGG CGAGGCCGCA
CGCTGCACGC TCCTGTTTTC GCAGAGCGAT ATTCCAAAAG TACGGTTCTT CATCGATGCA
ATGCAGGACG AAACTGAACG GGCAAGGGCA CTCGGAGCTT TTTCGAAAGT CATCTCCTTT
GCATCAACAT CGGTTTGTCG AAGAAAAACC CTGCTTGACT ATTTCGGCGA AACCTATCCG
CATGACAACT GCAACTCCTG CGACATCTGC CTTGGTACGC GCGAAGTTGT CGACTGCTCG
CTTGAGGCGC AGATGCTGCT TTCGGCCATA GCCCGTACCG AAGAGCGGTT CGGGGCTACG
CATATTGTGG ATATTGTCAC CGGCAGCGCC AACAAAAAGA TCCGGGACTT CGGCCATGAT
CGTCTCAAAA CTTACGGAGT GGGCAAGGGG CGCGACAAGA AATTCTGGCG GCAGCTTATC
GATGAACTTC TTGCACAAAA AGTTATCGCA AAATCGGAGG GCCTTTACCC GACAATCGTG
CTCCTGCCAA AAGCTGTTCA GATTCTGAAA AATGAAGCGC GGGTGGAGAT TGTCCGGGTT
CTGGAAAAGA AGAGCGCAAA AGCAGGAAAA CAGGAACTTT CAGGCTCATA CGATCACGAG
CTGTTCGATC AGCTCAGAGA GCTTCGCAAG CAGATTGCCG ACGAGCAGGG AATACCTCCC
TATGTTGTCT TTTCTGACCG CACGCTGCGC GATATGGCTT CGATTTTCCC GGAAAACAAC
GAGGCGATGC TCTCCGTTTC CGGAGTAGGC GAGGTCAAGC TGGATCGGTA TGGGCGACAA
TTTCTCAACC TTATAAACCG GTACAGATCC GATCATCCCG AACGGAATGC CTTGAGTTGA
|
|---|
| Protein sequence | MTTDSLNPEK KRGCSDAALY ETLRKVFGFR DFRPNQEMIV RTIIEKRDVF AVMPTGGGKS
LCYQLPAVLL PGTCMVISPL IALMKDQVDG ARANGIRAAF LNSSLAPEER TLVLRDLLSN
SLDLLYVAPE RFTLDQFQEM LKRVNISMAV IDEAHCISEW GHDFRPDYLS LSQLVTLFPD
LPVAAFTATA THQVQRDILD KLALRNPFVV RASFDRANLY YDIRFKENAS DQLVALLKQN
SGKAGIIYRT SRKSVNETAA LLKAKGFRVL PYHAGLGDDE RKQNQEAFIR DEVDVIVATV
AFGMGIDKSN IRFVIHADLP KSIENYYQET GRAGRDGEAA RCTLLFSQSD IPKVRFFIDA
MQDETERARA LGAFSKVISF ASTSVCRRKT LLDYFGETYP HDNCNSCDIC LGTREVVDCS
LEAQMLLSAI ARTEERFGAT HIVDIVTGSA NKKIRDFGHD RLKTYGVGKG RDKKFWRQLI
DELLAQKVIA KSEGLYPTIV LLPKAVQILK NEARVEIVRV LEKKSAKAGK QELSGSYDHE
LFDQLRELRK QIADEQGIPP YVVFSDRTLR DMASIFPENN EAMLSVSGVG EVKLDRYGRQ
FLNLINRYRS DHPERNALS
|
|---|
| |