| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0041 |
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| Symbol | dapD |
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| ID | 4568929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 42441 |
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| End bp | 43304 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639764642 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_910535 |
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| Protein GI | 119355891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCT ATGCTTCATT GAAAGAGGAA ATATCGGGTC TGGCTCCCCT CAGTGCCGTT
CAGCTTGCTG ACTATCCCGA TGCCCGCAGG GTATTCGATG ATTTCAAAAA GCTGCTTAAT
GCCGGAACAG TACGGGCAGC AGAAAAAAAA GAGGGAGAGT GGCAGGTCAA TTTGTGGGTC
AAGGAGGGTA TTCTGCTTGG CATGCGTCTT GGCAGACTTG TCGAAAGCCA TCTTGTTTTT
CCTGAAACCG GAGGCGGCTT TGATTTTTTT GATAAGGATA CCTATCCGCT CAGGCGGATG
ACGCTTGAAG ATCGGGTGCG TATCGTTCCT GGCGGATCTG CTGTCAGGGA TGGTTCTTAT
CTGGCTCCTT CCGTGGTTAT GATGCCGCCG GCCTATGTCA ATGTCGGCGC GTATGTTGAC
GAGGGTACGA TGATCGATTC CCACGCTCTT GTCGGGAGCT GCGCTCAGGT AGGCAAAAAT
GTCCATCTGT CCGCCGGGGT TCAGGTGGGA GGCGTGCTCG AGCCGGTGGG CGCCGTTCCG
GTTATTATCG AAGACGACGT TATGGTCGGC GGTAATTGCG GGATTTATGA GGGCACCATT
GTCAAAGAAC GTGCCGTTAT CGGTACCGGC GTTATCCTGA ACGGATCTAC GCCCGTGTAT
GATCTTGCTT TGGAAACCGT CTATCGAAAA ACTTCCGGGC ATCCGCTTGT TATTCCTGCC
GGCGCTGTTG TCGTTGCGGG TTCCCGTCGG ATGAAAGGCG ACTTTGCTCT TGAGCACGGG
CTGTCGCTCT ATACTCCGGT TATTATCAAG TATCGTGATG AAAAAACCGA CAGCGCTACT
GCCCTTGAAC AAGCTCTGAG ATAA
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| Protein sequence | MTSYASLKEE ISGLAPLSAV QLADYPDARR VFDDFKKLLN AGTVRAAEKK EGEWQVNLWV
KEGILLGMRL GRLVESHLVF PETGGGFDFF DKDTYPLRRM TLEDRVRIVP GGSAVRDGSY
LAPSVVMMPP AYVNVGAYVD EGTMIDSHAL VGSCAQVGKN VHLSAGVQVG GVLEPVGAVP
VIIEDDVMVG GNCGIYEGTI VKERAVIGTG VILNGSTPVY DLALETVYRK TSGHPLVIPA
GAVVVAGSRR MKGDFALEHG LSLYTPVIIK YRDEKTDSAT ALEQALR
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