| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0027 |
|---|
| Symbol | |
|---|
| ID | 4568915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 24550 |
|---|
| End bp | 26940 |
|---|
| Gene Length | 2391 bp |
|---|
| Protein Length | 796 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639764628 |
|---|
| Product | DNA polymerase B region |
|---|
| Protein accession | YP_910521 |
|---|
| Protein GI | 119355877 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGC TTTCGCATGA AATCCTGAAT AACGACCTGT TGTTCGGCAA AGACAAAGAA
GAAAATATCG TAGGTGCTTA TCAACTCTCT GATACGCATA TCAGACTGTT TTTCAGGAAT
GACGAAAAGA TCTCTCATCG CGACGAACCG TTCTACCCCT ATTTTTTCCT CTCCGAAAGT
TCGCTTCTTG AAGGATTCGT CCCGGAAGAG AACAGAAAGT ACTGGATTAT CAAACTAAAC
GGGAACAACT TCTACAGGTT TCTGGCCATT TTCAGCAGTT GGAAAGATTT CAGGTCAGGG
CTTGACATTA TTAACGGCAA AAACAGAGCC GCCTCCCCGG AAGCTGATAC AACAAATCCG
GCGCCTTCAT TCATCCCATT GACATATAGT AAAGGCGATG CCGTCACACA GTATTTTTTT
CAGAGCGGCA AAACCCTGTT TAAAGGGCTT GACTTTTCCC GATTGCGCAG AATGCAGCTT
GATATAGAAA CATGCTACGA TCCAGACAAA AAACGAACCG GTTCCGGAAT AGGTGATGAC
GAAATCATTA TCGTGTCGCT GAGTGATAAT ACCGGATGGG AACAAGTAAT ACATTCAAAA
AACAGAGGCG AAAAAAAACT TCTTGAACAT CTTGTTGAAA TAATCATAGC AAGAGATCCC
GATGTTATTG AAGGGCACAA TATTTTCAGC TTTGATCTGC CCTATATTCA AAAAAGATGC
GACCGCCACA ATATTAATTT TGCTATAGGA CGAAACGGCA CAACCGTACG ATCTTATCCA
TCCAGCATCC GTTTTGCTGA AAGAATTATC GATTACCCCT ATTTTGAAAT CCCCGGACGG
CACGTTATCG ACACGCTTTT TCTCGTACAA GGGTATGATG TTTCAAAAAG AGCCATGCAG
AGTTACGGTC TTAAAGCCGT AGCTAAATAT TTTGGCTTTG CCTCTCCTGA CCGTACCTAC
GTCGAGTACA AGGATATTAT TTCGACGTGG GAAAATAATC CCGATAAACT GCTTGCCTAC
GCTCTTGACG ATGTCAGAGA GACAAGGGCA CTTGCTTCGC ATCTTTCGGG CAGCAACTAT
TATCTGTCTC GAATGATGCC ATATACGTAT GCGATGACCT CAAGACTTGG ACAGGCAGCA
AAAATAGAGG CTCTGTTTAT CAGGGAATAT CTTCGACAAA AACACTCAAT TCCAAAACCG
TCGTCAGGCC AGCAGCATTC AGGCGGATAT ACCGAAGTTT TTCTCAAAGG AATTCTTGGC
CCGATAGTCT ATGCGGATGT TGAATCGCTC TACCCCTCCA TCATGCTTAC CTGCGGGATC
TGTCCGAAAA CAGATGACCT TCGAGTATTC CCGAGCGTTC TTGGAAACCT GAAAGATCTT
CGGTTCAAGA CAAAAAAATT ATCCGGAGAA GAGAAACAAA AGGGGAATCT TCAAATGGCC
GATAACTTTG ACGCTATGCA GGGCTCGTTT AAAATACTTA TAAATGCAAT GTATGGCTAC
CTTGGTTTCA ACAATGGAAT CTTCAACGAT TTCGATGAAG CAGACAAAGT CACAACCACG
GGGCAGGGCA TAGCAAAAAA AATGATCCAT GAATTTGAAG CAAGAGGATG CAAGGTTATC
GAGGTCGATA CCGACGGGAT TCTCTTTGTT CCTCCCCCCG GGATTGTGAC TGAAAATGAA
GAGAGAACCC TTGTCCGTGA AGTTTCTTCG CTGATGCCCG AAGGAATCAA TATCGGCTAC
GACGGTCGAT ATAAAAAAAT GATTTCATAC ATGAAAAAGA ATTATGCATT GCTCGATGAT
GATAATGTCA TGATCGTTAA AGGTTCATCG CTAACGAGTA GAAGCAGTGA AAAATTCGGT
CGCGATTTTG TGAAAAGGGG TTTTGAAAAA CTTCTTTCTG AAGATATTGC CGGTCTTCAC
GACCTCTATA CCGAATACAA AGAAAAAATT CTGGCGCACG CTCTTGATAT TGGTGATTTT
TCAAGAACCG AAACGCTTAA AAGTACGATG GAACAGTATC TTGAAGATGT ACGCTCAGGA
CGACGATCGA AATCGGTAAC CTATGAGATC GCATTGAAAA ACGGCAAACA GGTAACAAAA
GGAGAAAGGA TAACCTACTA CATATCAGGA ACCGGAGGAA TTAATCAAAC CTTTGAGAAG
GGAAAACTCG CTTCGGATTG GAAAAAAGAT AATCCTGATG ATAATACCGT TTTTTATCTG
AAACGTCTCG ATGAACATTG TCAGAAATTT CTTCCCTTTT TCAAACCACA GGATTACAGT
TCTATTTTCT CATCCGATAC GCTCTTCTCC TTTACTCCTG AAGGAATAGA GCTGATCAAG
GAGATCATTC ATACCGACAC TGATACGACA GGGTCCGCTG GTCTGTATTG A
|
|---|
| Protein sequence | MDTLSHEILN NDLLFGKDKE ENIVGAYQLS DTHIRLFFRN DEKISHRDEP FYPYFFLSES
SLLEGFVPEE NRKYWIIKLN GNNFYRFLAI FSSWKDFRSG LDIINGKNRA ASPEADTTNP
APSFIPLTYS KGDAVTQYFF QSGKTLFKGL DFSRLRRMQL DIETCYDPDK KRTGSGIGDD
EIIIVSLSDN TGWEQVIHSK NRGEKKLLEH LVEIIIARDP DVIEGHNIFS FDLPYIQKRC
DRHNINFAIG RNGTTVRSYP SSIRFAERII DYPYFEIPGR HVIDTLFLVQ GYDVSKRAMQ
SYGLKAVAKY FGFASPDRTY VEYKDIISTW ENNPDKLLAY ALDDVRETRA LASHLSGSNY
YLSRMMPYTY AMTSRLGQAA KIEALFIREY LRQKHSIPKP SSGQQHSGGY TEVFLKGILG
PIVYADVESL YPSIMLTCGI CPKTDDLRVF PSVLGNLKDL RFKTKKLSGE EKQKGNLQMA
DNFDAMQGSF KILINAMYGY LGFNNGIFND FDEADKVTTT GQGIAKKMIH EFEARGCKVI
EVDTDGILFV PPPGIVTENE ERTLVREVSS LMPEGINIGY DGRYKKMISY MKKNYALLDD
DNVMIVKGSS LTSRSSEKFG RDFVKRGFEK LLSEDIAGLH DLYTEYKEKI LAHALDIGDF
SRTETLKSTM EQYLEDVRSG RRSKSVTYEI ALKNGKQVTK GERITYYISG TGGINQTFEK
GKLASDWKKD NPDDNTVFYL KRLDEHCQKF LPFFKPQDYS SIFSSDTLFS FTPEGIELIK
EIIHTDTDTT GSAGLY
|
|---|
| |