Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0006 |
Symbol | |
ID | 4568894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 5093 |
End bp | 6328 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639764613 |
Product | transposase, IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_910506 |
Protein GI | 119355862 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCTT TGCCAAGTCT TACGAGCCAC TACCACCAAT TGTTGGGTCT TCCTCCAAAC TGGAATGTTG AGAACGTTAC CTTATCGATC ACGGGCAAGC AGATCGAGAT CCGACTGGTT TATACCGACA AACAAGCTGA GTGTCCGGAA TGCGGTCAAT TATGCAAAAT CTATGATCAT ACCAGTGAGC AACAGTGGCG TCATCTGGAT ACAATGCAGT TTGAGACGAT CATTGTGGCT CGTTTACCCC GATGCAAATG CAAAGAACAT GGGGTTAAAA CCGTCAGGGT ACCTTGGGCT GCAAGGCATT CGCGTTTCAC CTTGATGTTC GAAAGCTTTG CCATTGAACT GTTGATGCAC TGCTCCAGCA TCAAGGCGGC GTCAAGTATG CTGAATTTAA ACTGGCATGC CGTTGATGAA ATCATGCGTC GAGCCGTCAA GCGTGGTCTG AATCGTCGGG AATCCGAAGC TATCGCATAT CTGGGTATCG ATGAAAAAAG CTTTAAGGCT GGTCAGCATT ATGTGACGAC CCTGAATGAT CTGGATAAAG GCCGTGTACT TGAAGTGGTT GAACATCGAA CCAACGAGGC AGCCAAAGCG TTGCTTGAAT CACTGAACAA GAAGCAGCAA GAACAGGTTA AAGCGGTATC GGCTGACATG TGGAAGCCCT ATGCCAATGC CGTTGAAGAG CTGTTACCAA ATGCTGATCT GGTGCATGAT CGTTTTCATA TCAGCAAGTA TCTCAGTGAA GCTGTAGATG CGGTGCGCCG CAAGGAATCC CGTGAATTGG ATCAAGCCGG TGATAAGCGA CTGGTTGGCT CGAAATATGT CTGGCTGCGC AATCCGGAAA ACATGCGCGA ACAACAAAAG GTCGAATTGA GCAACCTGAT GGCCTGTGAA TTCAAAACCA GTCAGGCATG GGCATTGAAA AACATGTTTC GGTACTTCTG GCAGCTTGGC GACACCGATG GTGCAAGTTT CTTTTTTGAA TACTGGTCGA GGCGGGTCGA TGAGGTAGGC CTAACTCCGT TGATCGATGT CAAAGAACTG CTTCAGAGGC ATTTCGACCA TATTCTGACA TATTTTAAAC ACGCCATTAC CAATGCAGTT TCCGAAGGAT TAAACAGCAA AATTCAGATT GTCAAAGCTT CAGCACGGGG ATTTCACCGA TTCGAGAGTT ATCGAAACCG GATTTTGTTT TATTGCGGTA AACTCAATAT GGCGATCAGT TCATGA
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Protein sequence | MPPLPSLTSH YHQLLGLPPN WNVENVTLSI TGKQIEIRLV YTDKQAECPE CGQLCKIYDH TSEQQWRHLD TMQFETIIVA RLPRCKCKEH GVKTVRVPWA ARHSRFTLMF ESFAIELLMH CSSIKAASSM LNLNWHAVDE IMRRAVKRGL NRRESEAIAY LGIDEKSFKA GQHYVTTLND LDKGRVLEVV EHRTNEAAKA LLESLNKKQQ EQVKAVSADM WKPYANAVEE LLPNADLVHD RFHISKYLSE AVDAVRRKES RELDQAGDKR LVGSKYVWLR NPENMREQQK VELSNLMACE FKTSQAWALK NMFRYFWQLG DTDGASFFFE YWSRRVDEVG LTPLIDVKEL LQRHFDHILT YFKHAITNAV SEGLNSKIQI VKASARGFHR FESYRNRILF YCGKLNMAIS S
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