| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3612 |
|---|
| Symbol | |
|---|
| ID | 4574540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3994314 |
|---|
| End bp | 3994772 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639757671 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_903261 |
|---|
| Protein GI | 118582011 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000547821 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCTGC GCGTCCTCTG GGTCGGCAAG AGCCGGGAGG AGTGGGTGAA ACAGGCTCTG
GCCGACTATG CCACCAGAAT CCGGCGCTAT GCTCCACTGG AACTGGTGGA GGTTCGTGAC
GAGAAGGGGG CCATGGCCGA GGAGATGCGG CGGCGCGAGT GCGAACGGCT TGAGAAGCAG
ATCCCGCCCG GTGCTACGCT GCTGTTGCTG GACGAGCGGG GAGAGCAGAT GGATTCTCCC
GGTCTGGCGG CATATATCGG CAAACAGCGC GACAGCGGCA CGGCGGATCT GGTCCTCGTC
ATCGGCGGGG CCTACGGCTT TTCCGATGCT TTCCGGCGGC GCGGACGGCT GCTCTCCCTG
TCTCCCATGA CCTTTACCCA CCAGATGGTG CGGGTGTTTT TGCTGGAGCA GCTCTACCGC
TCATTTACCA TCCTGAACAA CGAGCCGTAC CACCACTGA
|
|---|
| Protein sequence | MRLRVLWVGK SREEWVKQAL ADYATRIRRY APLELVEVRD EKGAMAEEMR RRECERLEKQ
IPPGATLLLL DERGEQMDSP GLAAYIGKQR DSGTADLVLV IGGAYGFSDA FRRRGRLLSL
SPMTFTHQMV RVFLLEQLYR SFTILNNEPY HH
|
|---|
| |