| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3607 |
|---|
| Symbol | |
|---|
| ID | 4574535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3988607 |
|---|
| End bp | 3989812 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639757666 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_903256 |
|---|
| Protein GI | 118582006 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000824683 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGA CGGAAGAGAC CTACTTCAGA CAGAACAAGC GGCTGGCGCG TCTCATGCGC
CGCCTGGAGC GGGCGCGCAC CCCTCCCCCG CCGGTCACCT ACCGCCGCAA CCGCGTCGCG
CTACTGCCGG ACGGGGAGAG CTTCTTCCGC GCCTTCCTGA CCGCCATCCG CTCCGCTCGG
TACGTCATCC TGCTGGAATA CTACCTAATC CGCAACGATC GCACCGGTTC CGTCGTCGTG
GCCGAGTTGG CACGGGCCGT CGTGCGCGGT GTGCGGGTCA TGCTGATCTA CGATTACATC
GGCTGCATGG ATACCCCTTC GTCCTTCTTC AGGTCCCTTG CCCAGCAGGG AATCGAATTG
ATCCCCTTCA ACGTTCCCTC TTTCCGTCGT GGTATCCGCT GGTTCGACCG CCGCGATCAC
CGCAAGATGA TGGTGATCGA TGGCTGCCGG GCTTTCCTGG GCGGCTTCAA CATTGGTGAC
GAATACGCCG GCATTGCTTC ACCGCCGCAA CGCTTCCGCG ACCTGGGTTT CAGCGTGGAG
GGGAGCGCTG TCAGGGAGCT GATCGGCATT TTCAATGAAA CATGGCAGAT GGAGGTGGGC
CAGCTGCCGG AACTTCCGCG GGTCAGAGGG GTGAGCCCGG GCAGCTCCAG TCATGGGGAG
GCCAATGTGG CCTTTGTCAG CGGCGGCCCG CATCAGCGCA GCTCCTATAT CCGCCATGCT
TTTCTGGTCA ACATCGCCTC CGCCTCCGAG GATCTGTTGA TCGTCAACCC CTATTTCGTG
CCCGGCCCGC GCATTATCCG CTCCCTGCTG CGGGCGGTGC GGCGCGGGGT GCGGGTGCGG
CTGCTGCTGC CGGCACGCAG CGATGTGCCG CTGGTGCTGC TGGTGGGGCG CAGCTCCTAT
GGCGCCCTGC TTAAGGGGGG GGTGGAGATT TACGAGCTGG AGGATGGCAT TCTGCACGCC
AAGGTCATGC TGGTGGATGG AGAACGCACC ATCCTGGGGT CGGCCAACCT GGATCAGCGC
AGTTTCCACC GCAATTTCGA GATCAACGGC ATCATCGACA GCAGTTCCTT CGGCGCCCAG
ATTCGCCGGG TGGTGGAGCG GGAGGTGGTG GCCTCGCGGC GCGTTACCCT GCATGGGCAT
GAGCGTCGGG GGCTCGTGAC CCGTATGCTG GAAAAGCTGG TCAACCTGTT CGGCTGGTTT
CTGTAA
|
|---|
| Protein sequence | MAMTEETYFR QNKRLARLMR RLERARTPPP PVTYRRNRVA LLPDGESFFR AFLTAIRSAR
YVILLEYYLI RNDRTGSVVV AELARAVVRG VRVMLIYDYI GCMDTPSSFF RSLAQQGIEL
IPFNVPSFRR GIRWFDRRDH RKMMVIDGCR AFLGGFNIGD EYAGIASPPQ RFRDLGFSVE
GSAVRELIGI FNETWQMEVG QLPELPRVRG VSPGSSSHGE ANVAFVSGGP HQRSSYIRHA
FLVNIASASE DLLIVNPYFV PGPRIIRSLL RAVRRGVRVR LLLPARSDVP LVLLVGRSSY
GALLKGGVEI YELEDGILHA KVMLVDGERT ILGSANLDQR SFHRNFEING IIDSSSFGAQ
IRRVVEREVV ASRRVTLHGH ERRGLVTRML EKLVNLFGWF L
|
|---|
| |