| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3518 |
|---|
| Symbol | |
|---|
| ID | 4574429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3890183 |
|---|
| End bp | 3890701 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639757577 |
|---|
| Product | NADH dehydrogenase (ubiquinone), 24 kDa subunit |
|---|
| Protein accession | YP_903168 |
|---|
| Protein GI | 118581918 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAG GTTCAACGTG CCAGTTTACC GGTGGATGCA CAACCCCGGG CCGTTCAACG
TTACCGGCTA CGCTGTGTCA GGAGTTGGAC GACTTTGTCG CCGACCTCCC CACCAGGGAA
GGGCATCTGG TAACGGTGCT GCACAAGGCC CAGCAGCTGT TCGGTTACCT CCCCCGGGAG
GTGCAGCAGT ACGTTGCCGA CCTGATGGGT GTATCGCTGG CCAAGGTCTA TGGCGTGGCA
AGTTTCTACA CCTTCTTCAG CATGGTTCCC AAGGGGAAAT ACCCGATCTC CATCTGTATG
GGGACTGCCT GCTACGTCAA GCAGGCCCAC AAGATTGTGG ACGCGTTCAA GGATATCCTT
GGCGTTGAAA TCGGAGAGGT TACCGGGGAC GGCAAATTCT CCATCGACGT CCTGCGCTGC
GTGGGCGCCT GCGCCCTTGC CCCGATCCTG ACGGTGGGCG AGAAGGTCTA CGCCCACGTC
ACCCCGGACC AGGTCAAGGA AATTATCGCT GAGTACTGA
|
|---|
| Protein sequence | MQTGSTCQFT GGCTTPGRST LPATLCQELD DFVADLPTRE GHLVTVLHKA QQLFGYLPRE
VQQYVADLMG VSLAKVYGVA SFYTFFSMVP KGKYPISICM GTACYVKQAH KIVDAFKDIL
GVEIGEVTGD GKFSIDVLRC VGACALAPIL TVGEKVYAHV TPDQVKEIIA EY
|
|---|
| |