Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3442 |
Symbol | |
ID | 4571712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3801079 |
End bp | 3801873 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639757501 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_903092 |
Protein GI | 118581842 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCCTC TGCTCCCCTT CCCTTCCCAG CGGGAGATCA TTCTCTTTGC GCTCGTGCTT GGCAGGATGG CGGGGATGTT CAGCGCGTTA CCGGTATTCG GCGGCAAGCG ACTGCCGCTG CAGATCAGGG TCGTCGCCGT GATGGCGATG AGCCTGATCT GTTTTCCCCT TTTGAACGTG AATGCACCCA ATATACCCGA CGACACTATC TCCCTGGCGT TGCTGGCGCT TCGTGAAGTC ATGATTGGCA TTACCCTCTC CTTTGTGACC CAGATCATCT TCTCAGCAGT TGAATTCAGC GGGCAAATCA TAGGCATGCA AATGGGATTC ACCATGGCGG CGATAATGGA CCCGACCCAC GGCACCCAGA GCCAGGTCAT GTCGGTAATG CAAAGTCTTC TGGCCACGCT GATGTTTCTC TGCATGAGCA TTCACCACCT GTTCATTCGG GCCATTGTTG ACAGCTTTCA CATAATTCCC CTTGGCGTCT GGCATCTCAA CGGAGAAATA ATAACCTTCC TCACCAGGGC AACCGCTGAT GTTTTCGTTC TCGGTGTTCG ACTGGCAGCT CCGGTAATGG TTGCACTGCT GCTCACCAGC GTGACGCTCG GCATCATGGC TCGCTCTTTC CCCCAGATGA ATGTCTTCAT GATCAGCTTT CCACTCAATA TCGGAATTGG ATTTATCATT CTTGGTGCGA CACTGCCTAT GTTCTTCCAT GTTCTCGAGG TGTCGTTCGG TTCCGTCAAG GAGCAGATTG ATACAATATT CCGATTAATG GCAAAGGGGG GATGA
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Protein sequence | MFPLLPFPSQ REIILFALVL GRMAGMFSAL PVFGGKRLPL QIRVVAVMAM SLICFPLLNV NAPNIPDDTI SLALLALREV MIGITLSFVT QIIFSAVEFS GQIIGMQMGF TMAAIMDPTH GTQSQVMSVM QSLLATLMFL CMSIHHLFIR AIVDSFHIIP LGVWHLNGEI ITFLTRATAD VFVLGVRLAA PVMVALLLTS VTLGIMARSF PQMNVFMISF PLNIGIGFII LGATLPMFFH VLEVSFGSVK EQIDTIFRLM AKGG
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