| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3414 |
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| Symbol | dapF |
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| ID | 4574825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3774570 |
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| End bp | 3775406 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639757473 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_903064 |
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| Protein GI | 118581814 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0481236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA CGAAAATGCA GGGCGCTGGA AATGATTACG TCTATGTGAA CTGTTTTGAG
GAGACGGTTG CCGATCCGCG CCAGGTTGCC ATACAGGTTT CCAACCGCAA CTTCGGCATC
GGGTCGGACG GCCTGATCCT GATCATGCCC TCCACAACTG CCGATGTCCG CATGAGGATG
TTCAATTCCG ACGGCTCCGA ATCGGAGATG TGCGGCAACG GCATCCGCTG CGTGGCAAAA
TACGCCTTTG ATCACGGCAT CGTATCCAAG AAGGAGATCA CCGCCGAAAC CGGGGCCGGC
ATCCTGGCCC TGCGCCTGAT AGCGGGCAGT GACGGAAAGA TCGCAAAGGT GCGGGTCAAC
ATGGGACCTC CCCGCCTGGC CAGGAGCGAG ATCCCCATGC GGGGCGATGC GGCTCCCCAG
GTGGTGGGCG AACAGCTGAC CATACTGGAC CGCACCTTCA ACATCACCTG CGCCTCCATG
GGCAATCCGC ACTGCGTGAT CTTCGTGGAT GACGTGGCCG GCTTCCCGGT CTCCACCTAT
GGCCCGCTGA TCGAGAACCA CGAACTGTTC CCCAACCGCA CCAACGTGGA GTTCGTCCAG
ATTATCTCCC GCACCGAGGT GCGTCAGCGC ACCTGGGAGA GGGGCGCGGG CGAGACCCTG
GCCTGCGGCA CCGGTTCCAG CGCCGTCACG GCGGCCTGCG TACTGAACGG CTTGACGGAA
AAGCGCATAC TCAACCACCT CTCGGGCGGC GACCTGGAGA TGGAATGGGC CGAGGACGGC
AACATCTACA TGACCGGCCC GGCGGTGGAG GTGTTTTCCG GAGAGATCAT GCTGTAG
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| Protein sequence | MKFTKMQGAG NDYVYVNCFE ETVADPRQVA IQVSNRNFGI GSDGLILIMP STTADVRMRM
FNSDGSESEM CGNGIRCVAK YAFDHGIVSK KEITAETGAG ILALRLIAGS DGKIAKVRVN
MGPPRLARSE IPMRGDAAPQ VVGEQLTILD RTFNITCASM GNPHCVIFVD DVAGFPVSTY
GPLIENHELF PNRTNVEFVQ IISRTEVRQR TWERGAGETL ACGTGSSAVT AACVLNGLTE
KRILNHLSGG DLEMEWAEDG NIYMTGPAVE VFSGEIML
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