Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3410 |
Symbol | |
ID | 4572335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 3765140 |
End bp | 3770506 |
Gene Length | 5367 bp |
Protein Length | 1788 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639757469 |
Product | PAS sensor protein |
Protein accession | YP_903060 |
Protein GI | 118581810 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase [COG3899] Predicted ATPase [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGG AGCGGCTGCG CCATGAAGAG GCCATCATCA GGCGCCTGAA CCATCTGGAA CACGTCTCCC GGCTGGCTAC CGCAACCTCG CCGGCCAATG CCCTGGTTCT TGAGGATGGG GGTGACATAT CGCTGGCCCA CCTGATCGTC GGCCAGCGCC TTGAAATCCC CCGACTGCTG AAACTGGCCC GTCAGCTGGC GGATATCGTG GCGACAGTGC ATGGCGCCGG TGTGACGCAC CGGGACATCA ACCCCGGCAA TATCCTGCTG TCGGCTGAGG ATGCAGCCCC GATCCTGATC GACTTCGACC ACGCCACCAC CTTTGCAGAG GAACGCCCCC CCTTCATCCA TCACCGCGAG ATCGCCGGCA ACCTGCCCTA TCTGGCCCCC GAACAGACCG GCCGGGTGGG GCGCCCCCTG GACCAGCGCG CCGACCTGTA CGGTTTGGGC GCCACGCTCT ACGAACTCGC CACCGGTACT CCCCCTTTCA GCGCCCCGGA CCCGCTTGAA CTGATCCATC AGATCCTGAC GCAGGAACCC ACACCGCCGG TCGAACGGGA ACCGCGACTT CCACGACAGC TGTCGCTGAT CATCATGCGT CTGTTGGAGA AGGAGCCGGA CCGGCGCTAC CAGAGCGCGG AGGGGCTTGC CCACGACTTG GCGCGACTAC GGGACGGAGA CGAGCAGTTC GACCTGGGCG AGCAGGACTT TCCCCTGCGT TTCTCGCCGC CATCCCGGCT GGTGGGTCGG GAACAGGAGA TCCAGGCGCT GCGCAGCGCC CTGGAGCGGG CCTGTGCCGG CCAGGGCGCT TGCGTGCTGG TCAGCGGCGC GCCCGGAATC GGCAAAACCA CCCTGATCAA CGAGTTGCGG CCGATGGTCA CGGCGCGACG GGGATGGTTT GTGTCCGGCA AATTCGATCA GTACCGCCGC GACCACGCTT CGGACGGCGT CGCGCAGGCT CTGCGCGCGA TGGGTTGCCT GCTGCTGGCG GAAAACGAGG ATGAGCTTGG ACGCTACCGC ATGCGCATCC TGGACAGGGT GGGGAGCAAT GCCGGTCTGA TCACCGCCGC GCTGCCCGAA TTTGCCACCC TCCTGGGGGT TGCGCCGGCG GCCATATCCG GTGATCCGCT GGAGGCGCAG GTCAGGCTGC ACCAGGCCGG CCTGGAGCTG CTGCGCGCCG TTGCCTCGCC GGATCATCCG CTGGTCATGG TGGTCGACGA CCTGCAATGG GCAAACAAGG GCTCAATCGG CTTCATCAAC ACACTGCTTA CGTCCGGCGA ACTGAACGGT TTCCTTCTGG TATGCGCCTA TCGCGAGACA GAGGTAGCCC CTCTCCATCC GCTGTCTGCC CGACTGACCG CATGGCAGCG GCTTGCCGAC GCGCCGGTGC ACCTGGGGCT GCGGAACCTG CCATGCGCCG ACCTCTCCCT GATGGTGGCG GACATGCTCC GCCTGCGTAC AGCCGAGGCA ACGGAACTGG CGCGTTCCCT CAGTGCACGG ACACAGGGCA ACCCCTATGA CACCATGGAA CTGCTCAATG CGCTGCGCAG GGATGGCGTG CTGCGTCTGG GGAGGGATGG CTGGCGCTGG GACGAGGCGG CGATCCGTCG TCATGTGGGC CAAGGTGACG TAATCGACCT GGTGGCGGCG CGCATTACCG GGATGCCGAC GGTGACACGG GATCTGCTGG AGGTCATGGC ATGCCTGGGG AGCGAGACCC AAACCGGTCT GCTGGCAGCT GCGACCGGCC TGAGCGCCAC CGCGTTACAG GAGGCGATCA GGCCGGCGCT GGAGGATGGG CTGCTGGTGC TGGAGCAGGG AGAGTCCACC GGCAGCGATG GCAGCTGCCT CGTCCGCTTT CGCCACGACC GGGTGCAGCA GGCAGCCCAT GACGGACTGG AACCGTCGCG GCGCAGCCGG CTGCAGCTGA CCCTTGGTCG TCGTCTGGCC CGTCTGCCGG AATTCGTCTC CCTGGCGGCG GAGCAGTACC TGGCTGCGCT GGAAATGATA ACTGCTTCGG AAGAACGCCG CTTCGTGGCC GGGCTTTTTC ACGGGGCGGC AGGCGATGCG CGCGTCAGCG CCAACCATGG GGCAGCCGAG CGTTTTCTGG CGGCGTCCTT GGAGCTTCTC ACCTCCCTGG GGATGAGGGG GGATGACCCG GCCTGTGTCG CACTGGAGAC CGAATGGCAT GGCGCGCTCT ACTGCCTGGC TCGCCTGGAT CAGGCCGACA CGGTCTTTCA CTCCCTGGAG CAACGCTGCA GCGACCCGCT GGAACTGGTT GACGCCGCCT GCATCCAGAT CAACAGTCTC TCCAACCGCA ACCGGCAGCG GGAGGCGGTG GCTCTGGGGC TTGAGCTGCT GCGGCGCCTG GGATTCCCTC CCCCCCGTGA CCTGGAGGGG GAGGTGCAGC AGGGGCTGCG GGAGCTGTAC GACTGGGTCG CCGACCTGGA CGCCGAACGC GAGCTTATGC GCCGCGAGAT CGATGAGCCG CGGATGCTGG CCGCCGCGCG GCTCCTGCAG CGCATGGTGG CGCCGGCGTT CTTCTACGAT CCCCTGGTCA GCGCCTGGCT GACCCTCATG TCGCGTCGCC TCTGGGCAGA GCACGGCCCC TGCCCTGCGC TTCTGGCTGG GCTTGCCGGA GCGCCGGTGG TCACCACAGC CCTGCGCGAC GACTACGAGA CCGGCTACCG CATCGTCCGG CTGGCCCTGC GGGTGGGAGA AGTCCACGGC TACGAGCCGG AGAGCTCCTG GGTGCGCCAC TGCTTCGCCC TCTTCTCGGC CCACTGGGCC GAGCCGCTGG AGGGGAGCAT CGGCCAGGCT CTTCAGGCGC GCCGGGGGCT GCTGCAGGGA GGGGATCTGC AATACGCCTG TTTCACCTTC CACACCTCCC TGGCTGCCCT GCTGGAGTGC GGCGAGAGCC TGACGCTTCT TGTAACCGAA CTGGAGCAGG CCCTGGCCTT TGCCCGGCGC ACCGCCAACG GCTTCTCCCT GGCCTCCTTC CTGGCCTACC AACAGTTCGT ACGGGCGTTG CTCGGCTCGA CCGATGCTCC GGGCGGCTTT TCCGACCATT CGTTGGACGA GGCCGCATTC TCGGCCGGAC TGGGCGAAAA CCCCGTTGCG GCTGTTACGT TTCACATCCT GCGCGGACTG GCCGCAGCCC TGTTCGGTGA CGCGGTGGCC CTGATCAGGC ATGCGGCACA GGCCATGCCG CTTGTGCCGC ACATCCAGGG ATTCTATCCC GTGGCCCTGG CCCACCTGCT GCAGGCCCTG GCATGCGCGG AACGGCTCCG AAACAGCGCG ACACCTGATG AGCGTGCCGG ACTGCTGGCT GAACTGGATG TCTGCAGGGA GTGGCTGGCA TGCCGGGCCG AGCACGCGCC GACCAACTTC CTTCATCTGG TGAAGCTGGT GGAGGCGGAA CGTGCCTGGG CCACGGGTGA CTGCTGGGGG AGCACCCGTT CCTTCGACGC GGCCATGACA GAGGCGGGGA GGCGCCAAAG ACCATGGCAC CGGGCACTGG TGACCGAGCG GGCCGCCCGC TTCCATCTGG CCCAGGGGCT GGAGCAGACC GGTCGCACCC TGCTGGGTCA GGCCCGTGAG CTGTACCGCA GCTGGGGCGC GACCGGCAAG CTGCGCCAGC TCGAAAGAGA AGCTCCTTTC TTCTCCACCG GGGAGGAGGG GCGGGAGTAT CCGCAGGTGG CGAGCAGCAC TCTCTCCAAC GACGGCATCG ACCTGCTGGC CATGATGCGC GCCTCCCAGG CGCTCAGTTC CGAGACATCC CTCCAGCGGC TGAAAGAGCG GGTGATAGAC CTGCTGGGCG CCATGACCGG AGCAACCCGG GTGCAGCTTG TCATCCGCAC TGGCGACGGC CAGGGGTGGC ACCTGCTGGG TCCGGCGGAA AACGGCGATA CACGGATTTC CCTGGAACAG GCTGCCGACC AGGGGCTCGT GCCGCTCTCC GTTGTCCGCT ACGTTGAACG CACCCTGGAG CCGCTCCTGC TGCATGACGC CACCCAGGAT GACCGCTTCT GGCTCGACCC GTACCTTACG GGGCTCGAAC GCTGCTCCCT GTTGACGGTC CCGCTCATGA GCCATGGCGA GCCACGGGCA CTGCTGCTGC TGGAAAACAG CAGGGGGCGC AACGCCTTTT CCCTTGACCG GCTGGATGCG GTCATGCTGC TGGCCGGCCA GCTGGCGGTC TCCCTGGATA ACGCCCTGCT GTACGACTCC CTGGAACTGA AGGTGGCCGA ACGCACCTCA GCCCTGGAAA GCGAGATCGT TGCCCGCAGG TCGGCCGAAG AACTCTACCG CACCCTGGTG GAGCACTCCC CGGATGGCAT CCTGATGGTC AACCCTTGCG GCGGAGCGAT CGTCCGCTTC AACGGCCAGG CCCACCTGCA ATTGGGATAT TCCCGGGATG AGTTCTCCCG GCTCAGTATC GCGGACCTGG CGAAAACCGA TGCAGAACAT CTGGAGATGT TGACGGAACA GGGGGAAGTT CGGTTCGAGA CCAGCCATCG GACCAGGCAG GGGGAGGTGC GCACCATCCA GGCACGCTTC AAGGCGATCG ACTACGGTGG GAAGGCCATG GCCCACTGCA TCTATCGTGA CATCACCGAC AGCAGGAAAA TGGAGCAGGA GCTGCTCAAG GCCCGCAACC TGGAATCCCT CGGCCTACTG GCCGGCGGCA TCGCCCACGA TTTCAACAAC CTGCTGACCG CTATCTTGGG TAACATCTCC CTGGCGCAGA TGCTCGTCCC CGGAGACGGC AAGCTGTACA AGCTGCTTAC CCAGGCTGAA AAGACATCCC TGCGGGCAGG CATCCTGACC AGGCAACTGC TCACCTTCGC CCGGGGGGGA GCGCCGATCA GGCAGGTCAC GGCCCTGAGC GGGTTGGTCA GGGAGTGGGC ACTCTCATCG CTCCCCGGCA GTCAGGCCAG CTGCAGCTTC ACCATTCCGG ACGACCTCTG GCCCTGCCAG GTTGACGAAG GGCAGATCAG CCAGGTTATC AACAACCTGG TCATCAATGC GGATCAGGCC ATGCCGGAGG GAGGGACCAT CTCCATCAGT GCGGAAAACC TGCTGCTCGC GCCCGGCTCC CCCCTGCCGC TGGATTCGGG CCCCTACCTG AAGATCGACG TCAGGGACGA AGGAGAGGGG ATCCCTCCCG AGCTGATCTC CAGCGTCTTC GATCCCTATT TCACCACCAG GCAGGACCGC TCCGGCCTGG GGTTGGCCAC CACCTACTCC ATCATGAAGA GGCATGGGGG GCTGATTACC GTGGAGAGTG AAGCCGGGGT CGGAACGTTG TTCAGCCTCT ACCTGCCGGC CATGGCCGGG AAGGAAGCGG AGAAGGAACA GCCGTAG
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Protein sequence | MAMERLRHEE AIIRRLNHLE HVSRLATATS PANALVLEDG GDISLAHLIV GQRLEIPRLL KLARQLADIV ATVHGAGVTH RDINPGNILL SAEDAAPILI DFDHATTFAE ERPPFIHHRE IAGNLPYLAP EQTGRVGRPL DQRADLYGLG ATLYELATGT PPFSAPDPLE LIHQILTQEP TPPVEREPRL PRQLSLIIMR LLEKEPDRRY QSAEGLAHDL ARLRDGDEQF DLGEQDFPLR FSPPSRLVGR EQEIQALRSA LERACAGQGA CVLVSGAPGI GKTTLINELR PMVTARRGWF VSGKFDQYRR DHASDGVAQA LRAMGCLLLA ENEDELGRYR MRILDRVGSN AGLITAALPE FATLLGVAPA AISGDPLEAQ VRLHQAGLEL LRAVASPDHP LVMVVDDLQW ANKGSIGFIN TLLTSGELNG FLLVCAYRET EVAPLHPLSA RLTAWQRLAD APVHLGLRNL PCADLSLMVA DMLRLRTAEA TELARSLSAR TQGNPYDTME LLNALRRDGV LRLGRDGWRW DEAAIRRHVG QGDVIDLVAA RITGMPTVTR DLLEVMACLG SETQTGLLAA ATGLSATALQ EAIRPALEDG LLVLEQGEST GSDGSCLVRF RHDRVQQAAH DGLEPSRRSR LQLTLGRRLA RLPEFVSLAA EQYLAALEMI TASEERRFVA GLFHGAAGDA RVSANHGAAE RFLAASLELL TSLGMRGDDP ACVALETEWH GALYCLARLD QADTVFHSLE QRCSDPLELV DAACIQINSL SNRNRQREAV ALGLELLRRL GFPPPRDLEG EVQQGLRELY DWVADLDAER ELMRREIDEP RMLAAARLLQ RMVAPAFFYD PLVSAWLTLM SRRLWAEHGP CPALLAGLAG APVVTTALRD DYETGYRIVR LALRVGEVHG YEPESSWVRH CFALFSAHWA EPLEGSIGQA LQARRGLLQG GDLQYACFTF HTSLAALLEC GESLTLLVTE LEQALAFARR TANGFSLASF LAYQQFVRAL LGSTDAPGGF SDHSLDEAAF SAGLGENPVA AVTFHILRGL AAALFGDAVA LIRHAAQAMP LVPHIQGFYP VALAHLLQAL ACAERLRNSA TPDERAGLLA ELDVCREWLA CRAEHAPTNF LHLVKLVEAE RAWATGDCWG STRSFDAAMT EAGRRQRPWH RALVTERAAR FHLAQGLEQT GRTLLGQARE LYRSWGATGK LRQLEREAPF FSTGEEGREY PQVASSTLSN DGIDLLAMMR ASQALSSETS LQRLKERVID LLGAMTGATR VQLVIRTGDG QGWHLLGPAE NGDTRISLEQ AADQGLVPLS VVRYVERTLE PLLLHDATQD DRFWLDPYLT GLERCSLLTV PLMSHGEPRA LLLLENSRGR NAFSLDRLDA VMLLAGQLAV SLDNALLYDS LELKVAERTS ALESEIVARR SAEELYRTLV EHSPDGILMV NPCGGAIVRF NGQAHLQLGY SRDEFSRLSI ADLAKTDAEH LEMLTEQGEV RFETSHRTRQ GEVRTIQARF KAIDYGGKAM AHCIYRDITD SRKMEQELLK ARNLESLGLL AGGIAHDFNN LLTAILGNIS LAQMLVPGDG KLYKLLTQAE KTSLRAGILT RQLLTFARGG APIRQVTALS GLVREWALSS LPGSQASCSF TIPDDLWPCQ VDEGQISQVI NNLVINADQA MPEGGTISIS AENLLLAPGS PLPLDSGPYL KIDVRDEGEG IPPELISSVF DPYFTTRQDR SGLGLATTYS IMKRHGGLIT VESEAGVGTL FSLYLPAMAG KEAEKEQP
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