| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3403 |
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| Symbol | |
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| ID | 4572328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3755091 |
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| End bp | 3758024 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639757462 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_903053 |
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| Protein GI | 118581803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00684592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAGAT ATCTGATCGT CCTGCTCCTG CTTCTCTCCG GATCCCTGCC TGTCCTGGCG
GCAGGGATCC AATCCACCAC CCAGTATCCC GCTCAGTATT CAGCCGGCTA TTCAACCAAA
ACGTCCACGC AGACATCCAG CCAGTATTTC GGCCAGTCCT CCGGACAGTC TGCTGCCCAG
TCTCCTTCCC CATTGGGTTC CGCCTCTTCC ACACCTACAT TCCCGCAACA GGTGCCCGGA
GTTTTAACTC CCCCTTCTAC TCCGCAACCC GCGGGCTCTG GTGCTCCCCA GAACGGAACA
GCCGTTCCGG GGGGGGAGCA GAACGGCAGG GCGATGCTCA ACGGGGCACC CTCCAGGCCG
GAAGATCTGC TGTCGGACGC GGACAGGGCC AGGCTGCTGG AATACCGACA GATGACCGAG
GACGAGAGGG GCAAGGTATC AAAGTTCTGT ATGATGACCG ACTTTGAGCG CATGGTCATG
GAGAAGTACT GCCGCATGAC CGAGAACGAG AAGGCGGATG ACCCGGACTT TGCCCGGTTG
TCGGATGCTG AGCGTGCCAG GGTCATGGAG TATTCCCGCA TAACCGAAAT CGAGAAGTCG
CGCTATGACC GTTACTGCTC CATCGTTGAT CTGGAAACGG TCAGCTCCAA CGAACGGGAG
GATGTGTCTG AGATAGAGCG GGCCATCTCC GACCCCCGGT CCGATGATGA GCTGTTCAGG
CCCCAGCCGT TGAAGATGAA GCGGTTGGAG CAGTTCGGCT ACAACTTCTT CCGCCCCGAC
GCGTCCGCTT TCTCGTCGCT TACCGACGTG CCGGTGGGCG ACGACTACCT GGTGGGGCCG
GGTGACCGGA TCATCCTCCA GCTGTGGGGA AGTATCGACG GCGTTCATGA GCTGGAGGTG
AACCGGAGTG GAGAGGTGCT TTTGCCGCGG GTCGGCGCCG TGAAGGTCTG GGGAGTCCCC
TTTGGCGGCC TGCATGAGCT CTTCAGGAGG AGCCTGGCCA CCATCTTCAA GGATTTCCAG
CTTAACGTGA ATATGGGCAA GCTGCGCATG ATGAAGGTTT ACATCGTCGG CGAAGTGCGC
TCGCCCGGCG ATTACAACCT GAGCTCGCTC TCCACGGTGA TCAGCGCCCT GACCGCCGCG
GGTGGTCCCA CCAAAAACGG CAGCCTGCGC AATATCCAGA TCCGTCGGGT GGGCAAGCTG
CCCCAATCCG TGGACCTGTA CGATTTCTTC CTCAGGGGTG ACAGGAACTG CGACGTGCGC
CTGCAACCGG GTGACACCAT CTATGTGCCG GTGCTGCGCA AGGTGGCCGC TATCGGGGGC
AATGTACGGC GGCCGGCCAT CTTCGAGCTC AAAGACGAAA AAAGACTGAC CGACCTGCTC
AGGCTGGCGG CCGGCATCAG CGTCACCGGC AGCCTGCAGC GCATCCAGAT TGCCGGAATC
AATGCCCACG ATAACAGGCA GGTAAGGGAT TTCAACATCG ATCCCCGCAA GGGGGACAAG
CAGTTCACGG AAATAACCGA TTCCATCGGC ATCAGGCACA TGGATTCGGT GCGTATCTTT
TCCATCAACT CGGTTCTTCG CGGCCAGGTC AGGGTCGAAG GGTATGCCCT GCATCCGGGC
GACTACGCCC TTGCCAAGGG AATGCGGGTC AAGGATCTGT TCGGCCCGGA GGACGTTCTT
CCCGAGACCT ACCGCGACGT GGCGGTCATC ACCAGAATGC TGCCCCCCGA TTACCTTCAG
GAGAAGATCA GCATCAACCT GGGGCAGGCT CTGGCGGGGG AGCCCGACCA CAACCTGGAG
CTGAAGGAAT TTGACCGGAT CACCCTCTTC TCCCGCTGGG ATATGGAAGA GATGCCCATG
GCCAGGATCA GCGGCGAGGT GCAGAAGCCG GGTAGTTACC GCGTCTACGA GCGGATGTCG
CTGCGGGACC TGATATTCAA TGCCGGAAAT ATCAAGAAGA GCGCCTATCT GAAGAGCGCA
GAAATTAGCC GCTCCATCGT GGACAAGGAA GGTGTCAGGG CCCAGATCAT CGACGTAGAC
CTTGAGGAGG CCCTCAAGGG CAATCCGGCG CACAACGTCC TGATCGAGAA AATGGACGAG
GTGATCATAC GCCGCATCCC CAACTGGGTC GACGAGACAG GGCGCTATGT AACCCTGCGC
GGCGAGGTCA TGTTCCCCGG CGTGTATCCG GTCCTCAAGG GGGAGACGCT CTCTTCCGTC
ATCCGTCGCG CCGGCGGCTA TACCGACAGG GCCTATCTGA AGGGGGCCAA GTTCACCCGC
AAGAGCGTGG CCGAGATCCA GCAGAAGAAG ATGGACGAGA TTCTCGCCAA GACCGAGGAC
AGCGTTGCCA AGAAACAGGC CGAGCTGGCC TCAACGGCTT CCTCCAAGGA GGAGTTGGCG
GCGACTCAGG CTGCCCTGGA TGGGTTGCAG AAGAACATTC AGCGGCTTAA GAAGGAAAAG
GCGGAGGGGA GGGTTTCCAT CGCCCTCGCC CCCCTGGACA AGCTGCAGAA GAGCGGCTAT
GACCTGGAGC TGCTGGGGGG GGACAACCTG GAGATTCCCC AGTCCACCGG TACGGTCATG
GTCTACGGCG AAGTGTTCAG TCCGACCAAC CTGGTCCAGC GCCCCGGCAA GGATGTGGCT
TATTACCTGA GGAAGGCCGG TGGCCCCACC AGCAATGCCA ACGAGGACGA GATATACGTG
ATCAAGGTTG ACGGCACGGT GGTAAGCAGG GCCCAGTCAG GTTCCGGAAT CAGTTGGGAC
GAAGATGCGC GGAGCTGGTC CTTCGGCGGC TTCAAATCGA CCCCACTGGA TGCGGGTGAC
ACCATTGTCG TGCCCCAGGA GATGGACCGG ATCGCCTGGA CGCGGGAGAT CAAGGACATA
GCCACCATTC TGGGCCAGGT CGCCCTGATG GTGGGGGTTG TTGCGGGGAT GTAG
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| Protein sequence | MNRYLIVLLL LLSGSLPVLA AGIQSTTQYP AQYSAGYSTK TSTQTSSQYF GQSSGQSAAQ
SPSPLGSASS TPTFPQQVPG VLTPPSTPQP AGSGAPQNGT AVPGGEQNGR AMLNGAPSRP
EDLLSDADRA RLLEYRQMTE DERGKVSKFC MMTDFERMVM EKYCRMTENE KADDPDFARL
SDAERARVME YSRITEIEKS RYDRYCSIVD LETVSSNERE DVSEIERAIS DPRSDDELFR
PQPLKMKRLE QFGYNFFRPD ASAFSSLTDV PVGDDYLVGP GDRIILQLWG SIDGVHELEV
NRSGEVLLPR VGAVKVWGVP FGGLHELFRR SLATIFKDFQ LNVNMGKLRM MKVYIVGEVR
SPGDYNLSSL STVISALTAA GGPTKNGSLR NIQIRRVGKL PQSVDLYDFF LRGDRNCDVR
LQPGDTIYVP VLRKVAAIGG NVRRPAIFEL KDEKRLTDLL RLAAGISVTG SLQRIQIAGI
NAHDNRQVRD FNIDPRKGDK QFTEITDSIG IRHMDSVRIF SINSVLRGQV RVEGYALHPG
DYALAKGMRV KDLFGPEDVL PETYRDVAVI TRMLPPDYLQ EKISINLGQA LAGEPDHNLE
LKEFDRITLF SRWDMEEMPM ARISGEVQKP GSYRVYERMS LRDLIFNAGN IKKSAYLKSA
EISRSIVDKE GVRAQIIDVD LEEALKGNPA HNVLIEKMDE VIIRRIPNWV DETGRYVTLR
GEVMFPGVYP VLKGETLSSV IRRAGGYTDR AYLKGAKFTR KSVAEIQQKK MDEILAKTED
SVAKKQAELA STASSKEELA ATQAALDGLQ KNIQRLKKEK AEGRVSIALA PLDKLQKSGY
DLELLGGDNL EIPQSTGTVM VYGEVFSPTN LVQRPGKDVA YYLRKAGGPT SNANEDEIYV
IKVDGTVVSR AQSGSGISWD EDARSWSFGG FKSTPLDAGD TIVVPQEMDR IAWTREIKDI
ATILGQVALM VGVVAGM
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