| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3385 |
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| Symbol | |
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| ID | 4572536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3736415 |
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| End bp | 3738370 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639757444 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_903035 |
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| Protein GI | 118581785 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTACC CACGCATGGT CAGGGAAAAA CGCTTCTGGC GCATCCTGCT GTTCAAAGTC
TGCCTGATCG CCTTTTCGCT GCTGTTGGCC TTTTTGCTGC GCTTCGACTT CTCCATTCCC
TCCGCCGACT GGCGGCTTTT TGCGCAACTC CTTGCACCAC TCCTGATGAT CAAAATTGCT
GTTTTCTGGA AGATGGGGCT CAACCATGGC TGGTGGCGCT ATGTTTCCAT TGCCGACGTG
ATCGAGATCT TCAAGGCCAA TGTCTTCGCC TCGGCCCTGT TCGTGCTGTA CGTGGCCTTC
AGCCGTGGCA TGACGGGAAT CCCCCGTTCC GTGCTCCTGC TGGACGGGCT GCTCTGCTTT
CTCCTCGGTT GTGGCGTTCG CCTGGTTACC CGTGCCTACC GCGAAAACTA CTTCCCCATG
CCGACGATGC AGGAGAACAA CCTGAAGAGG GTGCTGGTGG TGGGCGCCGG CTCTGCCGGC
CAGGCCATCG TGCGGGAGAT GCGCCAGAAT CCTTCCCTGG CTATTTCGGT TGTCGGTTTC
ATCGACGACG ACCCCGAAAA GCAGGAACAG CACTTCCATG GCGTGCCGGT ACTGGGCGGA
CAGGAAAATC TGGACCCTGT TTGCCGGGAA CGTGGCGTTG CCGAAGTCAT CATTGCCATA
CCCTCCGCCA CCGGCAAACA GGTGCGGAGT ATCGTCGACC GCTGCCGTCA AGCGGGTGTT
ACCTTCAAGA CGCTGCCGGG CGTGGGCGAC CTGATTGGCG GAAACGTGAC CGTGCAGCAG
ATAAAGGATG TGGATCTGGA TGACCTGCTG GGGCGCGAGC CGATAACGCT GGATATCGAG
AGGATCAAGA GTTACCTGCA GGGAAAGAGA ATCCTGGTTA CCGGTGCGGC CGGCAGCATC
GGCAGCGAGA TTTGCCGCCA GGTGGCCCGC TTCAACCCGG ACAAGCTGAT TCTGCTGGAT
GTGGCGGAAA CGCCGCTCTT CTTTCTGGAG CGGGAGCTGG CCGAGCGTTT TCCCGCCCTG
CATCTGGCCA CCGTGATCGG CGATATCCGT GCCCGTACCC TGCTTAACGC CACCTTCGAC
GAGTTTCTGC CGGAAGTGGT CTTCCACGCC GCAGCCTACA AGCATGTGCC CATGATGGAG
GCCAATCCCG AGGCCGCGGC CAACAACAAC GTGCGCGGCA CCAGGGTCGT CGCCGATGCC
GCCCACCAGT TCGGCGTCAA ACACTTCGTG ATGATCTCCA CGGACAAGGC GGTAAATCCC
ACCAATATCA TGGGCGCCTC CAAGCGGGCA GCCGAGCTGT ACGTGCAGAA CCTGGCCAGG
AGGAGCACAA CTAATTACGT AACCGTCCGT TTCGGCAATG TGCTGGGGAG CAATGGCAGC
GTTATCCCCA TCTTCCGCCA ACAGATCAAG AGGGGCGGGC CGGTGACGGT CACCCATCCC
GAGGTCATCC GCTATTTCAT GACCATTCCC GAGGCAGCCC AGCTAGTCCT GCAGGCCGGG
AGCATGGGCA AGGGGGGAGA GATCTTCCTG CTGGACATGG GGGAGCCGGT CAAGATCCTG
ACCCTGGCCG AGGAGATGAT TCGACTTTCA GGATTCCGCC CCTACGAGGA TATCGATATC
AGCTTCACCG GCCTGAGGCC CGGGGAAAAG CTGTACGAGG AGCTGCTCCT GGCCGGCGAG
GGGATCCGAC CCACCTGCCA CGCAAAGATC ATGGTAGCCC AGGCGACCCT CCGCGAATGG
TATACCCTCA ACCGCCAGCT TGACGAACTG TACCGTGCCA CCCAGCGGGC CGACACGGGC
CGGATTGTCA GCCTCATCGA GGAAATCGTT CCCGAGTATT GTTGCCAGCG GAAGCCGGTG
GTACTGGCCT CTAAGAAAAA TCCGGAGCAG CCTGCCGTAT TCCCGACGGC AAAGCCGGAC
AGTGCGGCAC ATCCCGCTTT TATGCTCAAC CCATGA
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| Protein sequence | MYYPRMVREK RFWRILLFKV CLIAFSLLLA FLLRFDFSIP SADWRLFAQL LAPLLMIKIA
VFWKMGLNHG WWRYVSIADV IEIFKANVFA SALFVLYVAF SRGMTGIPRS VLLLDGLLCF
LLGCGVRLVT RAYRENYFPM PTMQENNLKR VLVVGAGSAG QAIVREMRQN PSLAISVVGF
IDDDPEKQEQ HFHGVPVLGG QENLDPVCRE RGVAEVIIAI PSATGKQVRS IVDRCRQAGV
TFKTLPGVGD LIGGNVTVQQ IKDVDLDDLL GREPITLDIE RIKSYLQGKR ILVTGAAGSI
GSEICRQVAR FNPDKLILLD VAETPLFFLE RELAERFPAL HLATVIGDIR ARTLLNATFD
EFLPEVVFHA AAYKHVPMME ANPEAAANNN VRGTRVVADA AHQFGVKHFV MISTDKAVNP
TNIMGASKRA AELYVQNLAR RSTTNYVTVR FGNVLGSNGS VIPIFRQQIK RGGPVTVTHP
EVIRYFMTIP EAAQLVLQAG SMGKGGEIFL LDMGEPVKIL TLAEEMIRLS GFRPYEDIDI
SFTGLRPGEK LYEELLLAGE GIRPTCHAKI MVAQATLREW YTLNRQLDEL YRATQRADTG
RIVSLIEEIV PEYCCQRKPV VLASKKNPEQ PAVFPTAKPD SAAHPAFMLN P
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