| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3382 |
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| Symbol | truA |
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| ID | 4572533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3732723 |
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| End bp | 3733457 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639757441 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_903032 |
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| Protein GI | 118581782 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000753277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCACCA TCAAACTGAC CATAGAGTAC GACGGCACCA ATTACGCCGG CTGGCAGGTC
CAGCCCAACG GCCTGGCCGT GCAGCAGGTG CTCGAGGAGG CGTTGCTGCG GCTCCTGGGG
GAGCGGGTGC GGCTGCGCTC TTCGGGACGC ACCGATGCCG GCGTGCATGC CCGCGCCATG
GTGGCCTCTT TCACCACCAG CCGGTCGCTT CCCCTGCAGG CGTTCGTGGG CGGGGCCAAC
CGCTTCCTTC CCGACGACAT CGCCATCCTC TCCGCGGCCG AGGCGGCGCC GGAGTTCAGG
CCGATCCAGG ACGCGCGAAG CAAATGGTAT CGCTACACCA TCTACAACGC GCCGGTGCGC
TCCCCTCTGC GGCGCCTGTT CAGCTGGCAC GTGCGCGAGC CGCTGGACAC GGATGCCATG
CAGCTGGCCG CGCATCATTT CCCGGGGCGC CACGACTTCG CCGCCTTCCG CGCCTCCAAC
TGCGCGGCAA AGACGACGCT GCGACGGATC GACTCCGTAA CCATCGCCAG TGAAGGGGAA
CTGATCGTCA TCGACGTGAT CGGGGAGGGG TTTCTGAAGA ACATGGTGCG GGTCATGGCG
GGAACTCTGG TGGATGTGGG GCGGGGGAGG TTCGAGCCGG AACGGGTCGC CTGGCTGCTG
GAGAATCCGG ACAGGAAAAA GGCCGGCGTG ACGGCGCCGG CCTGCGGACT CTGCCTGATG
GATGTCAGCT ACTGA
|
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| Protein sequence | MRTIKLTIEY DGTNYAGWQV QPNGLAVQQV LEEALLRLLG ERVRLRSSGR TDAGVHARAM
VASFTTSRSL PLQAFVGGAN RFLPDDIAIL SAAEAAPEFR PIQDARSKWY RYTIYNAPVR
SPLRRLFSWH VREPLDTDAM QLAAHHFPGR HDFAAFRASN CAAKTTLRRI DSVTIASEGE
LIVIDVIGEG FLKNMVRVMA GTLVDVGRGR FEPERVAWLL ENPDRKKAGV TAPACGLCLM
DVSY
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