Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3369 |
Symbol | |
ID | 4571576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3719465 |
End bp | 3720844 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639757428 |
Product | diguanylate cyclase |
Protein accession | YP_903019 |
Protein GI | 118581769 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCACAC ATGACAAATC GCAGGCCATC AGTTTGAAGC GCCGAATCAA CTCCGTGGTC AGCGCCAGGT GGTTCGCAAT TGCCGGCGCA CTCCTGGTCT TCGTGCTTAC GGTGTCTCTC GGCGAAGCCG TCCTCCAGGC CCAGCGGCAC GAAGCCGATA ATCAACGACG AATCGAGATG ACATCGTACG CGGCCATGCT GCGGGCCCAC GTGGAGAGGG AACTCAATTC ACTGCTCTAT CTCAACAGCG GCTTGGGAAG CTATCTCGTC GTGCGCAACA ACCGCATCCA GTCAAAGGAA ATCGGTGACA TGCTCGCCGT CCTGTACAAG GGGAACCCGC ATGTGCGCAA CTTCGGCATC GCCGTCGGTT ATCGCCTGAC CTACGTCTAT CCGCTCACCG GCAACGAGAA GGCCATCGGC ATCGATTACC GGAGTCTGCC GGGCCAGTGG CCCGTTATCC AGCGCATCGT CGCCAGCGGC AAGCCGGCGC TGGCCGGACC GCTCGACCTG GTCCAGGGGG GCAGCGGCCT GATCTACCGT GTACCCCTGT TCCTTGGCGG AAACTACTGG GGGCTTTTGT CCACGGTGAT CGACTCGGAT TCGCTGTTCA AGAGCGTGTT CAAGGAGTCA AAAGACGGCC GCTTCGAGCA TGCGCTGCGC GGCAGAGACG GCCTGGGCAG CAAAGGAGAC GTCATCCTCG GCAACATCGC CCTGTTCGCC CGGAGCGATG CCGTGGTTCA GGAAATCGAC ATCCCCGGCG GCCGCTGGGC GATTGCGGTG GCTCCGCGCT ACGACAACTT CAACCACAAC CTGCCGTACC TGGCGAGGAT TACCGTCGCC CTTGCCGGCG GCCTGATCGC CTGGATGCTC TACGCCCTGA TCCGCAGTCG TGCCGAGCTG GCGCGACTGG TGATGTTCGA TTCCCTCACC GGCCTGCCCA ACCGGCGCCT CCTGACGGAT CGGGCACGCG TCGCCTTTGC GCGCCAGCAT CGCCACCCGG ACCAGGCCTG CGCGATTCTG TTCCTGGACA TGAATGGTTT CAAAGACGTC AACGACCGGT ATGGCCACAA CGCGGGCGAT GCCGTACTGC GGGAGGTCGC ACGGCGCTGC CGGGCAACCG TGCGCGCCGA AGATACCGTT GCCCGCTGGG GTGGCGACGA GTTCGTCGTG CTGATGGAAG CGGTTTCCGA GGAAAGGGTG CAAGCGCTTG TCGCCCGATT GCGCGAAGTC CTCGAGACAC AGATCACCCT CGACGGCAAA CGCTTCCAGC TTGGCGTATC GGTCGGGGTT GTGCTTCACC GCGAAGGCGA CGCCAGCCTT GAGGAGATCA TCGGGATGGC CGATCAACGC ATGTATTCCG ACAAGCTGCA GCGCAGGTAG
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Protein sequence | MGTHDKSQAI SLKRRINSVV SARWFAIAGA LLVFVLTVSL GEAVLQAQRH EADNQRRIEM TSYAAMLRAH VERELNSLLY LNSGLGSYLV VRNNRIQSKE IGDMLAVLYK GNPHVRNFGI AVGYRLTYVY PLTGNEKAIG IDYRSLPGQW PVIQRIVASG KPALAGPLDL VQGGSGLIYR VPLFLGGNYW GLLSTVIDSD SLFKSVFKES KDGRFEHALR GRDGLGSKGD VILGNIALFA RSDAVVQEID IPGGRWAIAV APRYDNFNHN LPYLARITVA LAGGLIAWML YALIRSRAEL ARLVMFDSLT GLPNRRLLTD RARVAFARQH RHPDQACAIL FLDMNGFKDV NDRYGHNAGD AVLREVARRC RATVRAEDTV ARWGGDEFVV LMEAVSEERV QALVARLREV LETQITLDGK RFQLGVSVGV VLHREGDASL EEIIGMADQR MYSDKLQRR
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