Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3348 |
Symbol | |
ID | 4572411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 3695559 |
End bp | 3696920 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639757407 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_902998 |
Protein GI | 118581748 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACAGCA ACGATACACA GGAACAGGCA TTGCGAAGCG AAGCGATTCG TGCTGCCATT GCCCACTACA GTCACGCCCA TGCTGCACTA AAATCGTACC GTCCCGGCGA GCGCATTCCT TACGCCGCAC GCGTCTTTGA TGAAAAGGAA ATTGCCAATC TGGTTGACTC TGCGCTGGAT TTCTGGCTGA CCAGCGGACG ATTCGCCGCA CGATTTGAAC GGGAATTTTC CTCTTTCGTC GGCGTCAGGC ACACCATGCT GACCAACTCT GGCTCATCGG CAAACCTGCT GGCGTTCATG GCCCTTACCT CACCAAGCCT GAAAGAGCGG CGCATCAGGC CGGGAGACGA GATTGTAACA GTGGCCGCTG GTTTTCCCAC CACAGTTTCG CCAATCATCC AATACGGGGC AGTACCTGTA TTCGTCGACG TAACCCTGCC CGAATACAAC ATAGATACGG CTATGCTCGA AGCCGCTCTT TCTTCCAGAA CCAAGGCGGT CATGGTAGCC CATACTTTGG GTAATCCGTT TGACATAGCG AAGGTCAGCG GGTTCTGCGT CCGGCACGGA CTCTGGCTGA TCGAAGACAA CTGCGACGCA CTAGGGTCAC GATACTGCCT CGATGGCGTC TGGGGCTTCA CAGGGAGTTT CGGCGACCTT GCCACATCCA GTTTCTACCC TCCGCACCAC ATGACCATGG GTGAGGGAGG AGCCGTCTAC ACCAATGACC CGCACCTGAA GCGCTTGGTG GAATCGTTCC GCGATTGGGG ACGCGATTGC TGGTGTCCCT CTGGCCAAGA CAATACCTGT GGTAAACGTT TTGCGAAACA GTACGGAGAG CTTCCTCCGG GCTACGATCA CAAGTATGTC TATTCCCATT TCGGTTATAA TCTTAAGTTA ACCGATATGC AGGCCGCCAT TGGTTGTGCA CAGCTTGAAA AACTTCCCAC GTTCATCGAT GCGCGCAAAA AGAACTGGTG CAAACTGCGT GAGGGGCTCA GCGACATGGA AGACAGCCTG ATCCTCCCCG GCACCACAAG AGACTCTGAT CCCTCCTGGT TCGGTTTTCT GCTGACAATC CGTGAAAATA CGGCCTTCAA TCGAGATGAA CTGGTCAATT ACCTGGAGTC AAGGGGTATC CAAACACGGA TGCTGTTTGC CGGTAATCTG ATCAAGCATC CCTGTTTTGA TGAGATGCGC GCAGGCGGAA CGGGATACAG GGTTGTTGGG GAACTGGCGA TAACCGAACG CATCATGCGC GATACATTTT GGATTGGGGT CTATCCGGGT ATGACAGAGG AAATGATTGC GTATATGCTT GATACCATCC GGGCATTCAT CAAGCGTGGC GGATCGACAT GA
|
Protein sequence | MNSNDTQEQA LRSEAIRAAI AHYSHAHAAL KSYRPGERIP YAARVFDEKE IANLVDSALD FWLTSGRFAA RFEREFSSFV GVRHTMLTNS GSSANLLAFM ALTSPSLKER RIRPGDEIVT VAAGFPTTVS PIIQYGAVPV FVDVTLPEYN IDTAMLEAAL SSRTKAVMVA HTLGNPFDIA KVSGFCVRHG LWLIEDNCDA LGSRYCLDGV WGFTGSFGDL ATSSFYPPHH MTMGEGGAVY TNDPHLKRLV ESFRDWGRDC WCPSGQDNTC GKRFAKQYGE LPPGYDHKYV YSHFGYNLKL TDMQAAIGCA QLEKLPTFID ARKKNWCKLR EGLSDMEDSL ILPGTTRDSD PSWFGFLLTI RENTAFNRDE LVNYLESRGI QTRMLFAGNL IKHPCFDEMR AGGTGYRVVG ELAITERIMR DTFWIGVYPG MTEEMIAYML DTIRAFIKRG GST
|
| |