Gene Ppro_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3270 
Symbol 
ID4571765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3602581 
End bp3603372 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID639757328 
Producttrehalose-phosphatase 
Protein accessionYP_902920 
Protein GI118581670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAGA ACAGACCGGG ACGCTACCTG CTGGACGATG CCGGATTGAC GGAGCTTAGG 
TCATTCGTTG ATGCAGGCAC GCTCCTGGCT TTTGACCTTG ATGGAACCCT GGCGCCAATC
GTGGCCGACC CGTCGGCCAT CGTGATTCCC GGCCATATCC AGGAGAGTAT GGCCCGCCTT
TGTGCCATGG CAACTGTCGT CATACTGACC GGCCGTGGCC GTGAGGATGC CTTATCCTTT
CTCGGCTTTG AGCCGTGCAT GGTTGTGGGC AATCACGGCG CGGAGGGACT GCCCGGATGG
GAGGAACGCG AACGGGAGTT CAGGGAGCTC TGCGCCGGCT GGAAGCAACA GCTTCACCTG
TCTCTGGCCG GCACTTCCAG CGGCATTTTC CTGGAAGACA AGCGACTGTC GCTGTCACTC
CATTATCGCA ACGCAGCAGG CCGGGGTGAG GCCTTTGCGA CGATCATAGA GGCGATCGGG
GCACTGGTGC CCGCTCCGGA GCGGATTTCA GGCAAGTTCG TGGAGAACGT CGTACCGCGG
GGTGCGCCTC GCAAGGGGCG TGCCCTGTTG GACACCCTGC GCTATCTGGG TACGGGGCGG
GCGTTGTATG TAGGAGACGA CGCCACGGAC GAGGACGTGT TCCGCCTGCG CAACGAGCGA
ATATTCGGAG TCAGGGTGGG TGCGAGTTCC TCGACAGCGG CAGACTATTA TCTGAAAGAC
CAGCAGGAAA TCGACCGTGT GCTCCGTGAG ATCATTGACA TTCTCTCGCA TCCTTCCTGC
GATGCGGCCT AG
 
Protein sequence
MIQNRPGRYL LDDAGLTELR SFVDAGTLLA FDLDGTLAPI VADPSAIVIP GHIQESMARL 
CAMATVVILT GRGREDALSF LGFEPCMVVG NHGAEGLPGW EEREREFREL CAGWKQQLHL
SLAGTSSGIF LEDKRLSLSL HYRNAAGRGE AFATIIEAIG ALVPAPERIS GKFVENVVPR
GAPRKGRALL DTLRYLGTGR ALYVGDDATD EDVFRLRNER IFGVRVGASS STAADYYLKD
QQEIDRVLRE IIDILSHPSC DAA