| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3233 |
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| Symbol | |
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| ID | 4573195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3552375 |
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| End bp | 3553592 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639757292 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_902884 |
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| Protein GI | 118581634 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000196171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA CCGCGCTGAT AGCCCTAGCG CTCCTGCTGG TAGCGGGAAT CGCCATTTCC
ACCTACCTGA GACGGGCGCC GGAAATCACC TACAGGACCG CCAGAATCCA ACGGGGCACC
ATCGTCTCCG GCGTCTCCGC CACCGGAAAC GTCAGCGCCG TGACCACGGT CCAGGTGGGA
ACCCAGGTTT CCGGCACGAT CCACAAGCTG TACGTGGACT ACAACTCCCC GGTCAAAAAG
GGGCAGCCCA TCGCGGAGAT CGACCCCTCC CTGTTCAGGG CGGCGGTGGA GCAGTCCCGG
GGCAACAATC TGGTTGCCAG GGCCAACCTG CAGAAGGCCA GGGTAGTGCT GGTGGACGCC
GAGCGTACCA TGAAACGCAA CAGCACGCTC CTGAAGGAGG GGGTCATCTC CCAGGGTGAT
TTCGACACGG CGGAAACCGC CTACCAGTCA GCCAGGGCGG CGGTGGAGGC GGCCCAGGGG
ACGGTGGCCC AGACAGAGGG GGCGCTCATG CAGGCCCGCA CCAACCTGAA CTACTCCATC
ATCCGCTCGC CGGTGGACGG CATCGTCATC TCCCGGGCAG TGGACGTGGG CCAGACCGTG
GCGGCCTCCT TCCAGACCCC CACCCTCTTC ACCATCGCTC AGGACCTGAC CAAGATGCAG
ATCGAGGTCA GCGTTGACGA GGCGGACATA AGCAGCATTA GGCAGAGCCA GACTGTGACC
TTCAGCGTCG ACTCCTACCC GGAGCAATCC TTCAGGGGGA GGGTGACCCA GATCCGCAAC
GCGCCGATCA TCACCCAGAA CGTGGTCACC TATGTGGTTC TGGTAACCGT GGACAACAGC
GACCTGAAGC TGAAACCGGG CATGACCGCC AACGTGACCA TCGAGGTGGC CCGCAAGGCT
TCCGTGCTCA GGCTTCCCCT GGCCGCCCTG CGCTTCAGGC CCAGGTCCGC GACGGACGCG
GGCACGACTC CGCGGCCCAG GAACAGCACC GCCACCCGCC CTCCCCAGCA GGCCACAGGC
GAGCAGCGGG TCCACATCCT CAGGGAGGGC AAGCCGGTGG CAATCGGCAT CAGGACCGGC
ATCGCCGACG ACAGCGCCAT CGAGCTGACC GGAGGAGCGC TCAAAGAGGG GGATCTGGTC
GTCATCGAAC AGATCGGCGG CACCGGAAAG AAGAAGGCCA ACGCAGCGGG CGGTTCCCCC
ATGGGTCCGC GCTTCTAG
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| Protein sequence | MRKTALIALA LLLVAGIAIS TYLRRAPEIT YRTARIQRGT IVSGVSATGN VSAVTTVQVG
TQVSGTIHKL YVDYNSPVKK GQPIAEIDPS LFRAAVEQSR GNNLVARANL QKARVVLVDA
ERTMKRNSTL LKEGVISQGD FDTAETAYQS ARAAVEAAQG TVAQTEGALM QARTNLNYSI
IRSPVDGIVI SRAVDVGQTV AASFQTPTLF TIAQDLTKMQ IEVSVDEADI SSIRQSQTVT
FSVDSYPEQS FRGRVTQIRN APIITQNVVT YVVLVTVDNS DLKLKPGMTA NVTIEVARKA
SVLRLPLAAL RFRPRSATDA GTTPRPRNST ATRPPQQATG EQRVHILREG KPVAIGIRTG
IADDSAIELT GGALKEGDLV VIEQIGGTGK KKANAAGGSP MGPRF
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