| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3221 |
|---|
| Symbol | |
|---|
| ID | 4573183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 3538387 |
|---|
| End bp | 3539889 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639757280 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit D |
|---|
| Protein accession | YP_902872 |
|---|
| Protein GI | 118581622 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACC TGCTCTTTGT ACCGCTGTTG ATCCCGCTTG CCACCGCGAC CGCGGGACTC
CTGGCCTGGA GAAGGAGGAA CCTGCAACGC ATGCTGGGGG TCTGCGGAAC GACATCCCTG
CTGGTGGCCG GCTTGTGCCT ACTGACGCAG GTGCGCGGAA AGGGGATTCT GAGCGTCCAG
GCGGGAAACT GGCCGGCTCC CTTCGGCATT ACCCTGGTCG CCGACAGTTT CAGCGCCCTG
ATGATAGCCG CAACCGGCTT CATGGGACTG GCCGTATCGG TCTATTCGTT GACCGACGCG
GATGCAGGCC AGGAATCGCT CGGTTACCAC CCCCTGCTGC AGGTCCTCCT GCTGGGGGTC
TGCGGTTCGT TTCTCACCGC TGATCTCTTC AACCTCTATG TCTGGTTCGA GGTGCTGATG
ATCTCTTCCT TCGTGCTGCT GGCCCTGGGG GGGCGCAGGG AACAGATCGA GGGCGCCATC
AAGTATGTAG CCCTCAACCT GACCGCTTCG GCCTTCTTTC TGGCAGGAAT CGGCCTGCTC
TACGGCGTAA CCGGCACCCT CAACATGGCC CATGTGGCGG TTCAGTTGCG CGAAACGGAA
CATACTGGCA CCGTACCGAT CATAGCGGCC CTGCTCTTCA GCGCCTTTGG CGTCAAGGCG
GCGGTCTTTC CGTTTCATTT CTGGCTGCCC GCCTCCTACC ACACCGCGCC GATTGCGGTG
ACGACCCTTT TCTCGGCGCT GCTTTCAAAA GTCGGTATCT ATGTTCTGAT CAGGATATTC
ACCCTGATCT TCGTTCAGGA GGCAATTGCC GGTCAGGCCA TCATACTGAC GGCAGCGGGC
CTGACCATGC TGATCGGAGT TCTGGGCGCC ATGGTTCAGT ACGAGATGCG GCGCCTGCTG
TCGTTTCATA TCGTGAGCCA GATCGGGTAC CTGCTGATGG GGCTGGGCCT CATGACACCG
CTGGCTCTGG CCGGCACCAT ATTCTTCATG GCCCACATCA TCGCCGCGAA ATCCGCTCTC
TTTTTGACAA CGGGCATCGT GGCCCGCCTG ACAGGCAGCA GCGAACTGCC CCGCTCCGGC
GGCCTGTACC ATCAGCGGCC GTTTCTGGCG GCGATCTTCC TGCTGCCGGC GCTTTCCATG
GCCGGATTGC CGCCGCTGTC CGGATTCTGG GCCAAACTGG CCCTGATAAC GGCAAGCCTG
GGCCATGGGC ACTACCTGCT GACCCTGGTG GCCCTGCTGG TAAGCCTCAT GACGCTGTTC
TCCATGACCA AGATCTGGAA TGAGGCTTTC TGGAAGACAC GTCCTCCCGG GGAGGAAACG
GATCCGCGCC CCATGCCCGT TCTCTCCAGC GTGCAGTTGT ACGCACCGGC CCTGGCATTG
GCGCTGGTAT CGGTGACGAT GGGACTGGGC GCCGAACCGT TCTTCCGGCT GGCACTTGTT
GCCGCCGGCC AGTTGCTGGA ACCAGCCGGC TATATCACCG CCGTCCTGGG GGTGCGACCG
TGA
|
|---|
| Protein sequence | MNNLLFVPLL IPLATATAGL LAWRRRNLQR MLGVCGTTSL LVAGLCLLTQ VRGKGILSVQ
AGNWPAPFGI TLVADSFSAL MIAATGFMGL AVSVYSLTDA DAGQESLGYH PLLQVLLLGV
CGSFLTADLF NLYVWFEVLM ISSFVLLALG GRREQIEGAI KYVALNLTAS AFFLAGIGLL
YGVTGTLNMA HVAVQLRETE HTGTVPIIAA LLFSAFGVKA AVFPFHFWLP ASYHTAPIAV
TTLFSALLSK VGIYVLIRIF TLIFVQEAIA GQAIILTAAG LTMLIGVLGA MVQYEMRRLL
SFHIVSQIGY LLMGLGLMTP LALAGTIFFM AHIIAAKSAL FLTTGIVARL TGSSELPRSG
GLYHQRPFLA AIFLLPALSM AGLPPLSGFW AKLALITASL GHGHYLLTLV ALLVSLMTLF
SMTKIWNEAF WKTRPPGEET DPRPMPVLSS VQLYAPALAL ALVSVTMGLG AEPFFRLALV
AAGQLLEPAG YITAVLGVRP
|
|---|
| |