Gene Ppro_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3198 
Symbol 
ID4573265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3514521 
End bp3515945 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content63% 
IMG OID639757257 
Productprotease Do 
Protein accessionYP_902849 
Protein GI118581599 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT TTCTACGAAC CGTACTCCGC ATCGTCATCT GCTCCCTGAT GGTTTCCGCT 
CTTGCCGGCT GTTCCGGCGA TGGTGACGGG CCGCTCTTCT ATGAGTCCAA GCGCAAGGGG
GGGGAGGCCG AGGCCCCGGT CAAGGATGTG CCGGCAGATA TGCTGGCCAC CCAGAAGGCC
TTCAGTCAGG TCGCGAAGAA GGTCACTCCC TGCGTCGTCA ACGTCTCCAC CGTCGGCAAG
AAGATGGCTG TCCAGCCTTT CTTCCAGATG TCGCCTCTGT TCGAGGACTT CTTCGGCGGC
CCCCAGTACC GTCAGAACAA GAGCCTCGGT TCTGGTTTCA TCATCAGCAG GGATGGCTAC
ATCGTCACCA ATGAGCATGT GGTGCGCGAC GCCGAGAGCA TCCAGGTGAA GCTCTCCAAC
GACAAGGTCT ACGACGCCAG GGTAGTGGGC AGCGACCAGA AGACCGACAT TGCCGTGATC
AAGATCAATG CCGGCGATCT TCCCGTTGCC GTGCTGGGTG ATTCCGACAA GCTGGAGGTG
GGGCAGTGGG CCGTTGCCAT CGGCAACCCC TTTGGCCTGG ACCGCACCAT GACCGTCGGC
GTCATCTCCG CCACCGGACG CTCCAACGTG GGTATCGAGA CCTACGAGAA TTTCATCCAG
ACCGACGCCT CCATTAACCC GGGCAACTCG GGGGGGCCGC TCTTGAACGT CCATGGCGAG
GTGATCGGCA TCAATACCGC CATCGTGGCC GCCGGACAGG GGATCGGTTT CGCCATACCG
GTGGCCATGG CCAAGCCGAT CTTCACCCAG TTGATCAACA AGGGGAGTGT CAGCCGGGGG
TGGATGGGGG TGACCATCCA GCCGGTCACC GAAGAGTTGG GGCGGTCCTT CGGATTGCAC
CAGGCCAAGG GCGCTCTGAT CAGCGGGGTC GTGGCGGGCA GCCCAGCCGA CAAGGGGGGG
CTGCGCCAGG GGGACATCAT CACCGCCTTT AACGGCACCG AGGTCAAGGA CCCCGCCCAG
CTTCAGCGCC TGGTGGCCGA GGCGGGCATC GGCAGGCCGG TCAGGGTTAC CCTGTTCCGC
AACGGCAGGT CGCTGGAGCT GAGCATGACG CTCGTGGCGG CCGAGTCGGC AGCCCAGGCC
AGGAGAGGCG CTGGCGGCGA GCGGCACCAG GTCCAGGCCG ATCCGCTGGG GCTGGTGGTG
GAGGATATGG ATGGCGCAGG CGTGGTGGTG GCCGATGTGA TCAATGGCGG TAGTGCCGCC
GATGTGGGCA TCCGCCCCGG AGACCTGATC GTCTCCATCA ACCGCAAACG GATTGCCACT
ACAGCCGAGT ACCAGAAGGC GATTCGCCAG GCCCAGGGGG GGACCCTGAT CATTCTTGTC
CGTCGGGGCG ATTCAAGCAT CTATTTCGCC CTGAAGAGCA GATAG
 
Protein sequence
MKLFLRTVLR IVICSLMVSA LAGCSGDGDG PLFYESKRKG GEAEAPVKDV PADMLATQKA 
FSQVAKKVTP CVVNVSTVGK KMAVQPFFQM SPLFEDFFGG PQYRQNKSLG SGFIISRDGY
IVTNEHVVRD AESIQVKLSN DKVYDARVVG SDQKTDIAVI KINAGDLPVA VLGDSDKLEV
GQWAVAIGNP FGLDRTMTVG VISATGRSNV GIETYENFIQ TDASINPGNS GGPLLNVHGE
VIGINTAIVA AGQGIGFAIP VAMAKPIFTQ LINKGSVSRG WMGVTIQPVT EELGRSFGLH
QAKGALISGV VAGSPADKGG LRQGDIITAF NGTEVKDPAQ LQRLVAEAGI GRPVRVTLFR
NGRSLELSMT LVAAESAAQA RRGAGGERHQ VQADPLGLVV EDMDGAGVVV ADVINGGSAA
DVGIRPGDLI VSINRKRIAT TAEYQKAIRQ AQGGTLIILV RRGDSSIYFA LKSR