Gene Ppro_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3178 
Symbol 
ID4573280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3493059 
End bp3494225 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content61% 
IMG OID639757237 
Producttwitching motility protein 
Protein accessionYP_902829 
Protein GI118581579 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT 
TIGRFAM ID[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGA ACGAGATTCT CACCATTGCC GTCAAGGCCA AGGGTTCCGA CATTCACATC 
AAGACCGGCC TGCCCCCCAT CGTGCGCATC GACGGCAGGC TGCACCCCAT CCCCAATGCC
CCCCGGCTGG CACCCGATAT CGTGGGAAAC ATGGCCCAGT CCATGATGAA CGACCGCCAG
CGGCGCATCT TCGAGGAAAG TTCCGAGGTG GACCTGGCCT ATGCCGTGCC CGGCCTGGGA
CGCTTCAGGG TCAGCGTGTA CCGCCAGCGC GGCACCGTTG CCATGGTCTT TCGCGCCATC
TCCTTCGCCA TCCCCACCTT GGATGGTCTC AACCTGCCGC CGGTGATCAA AAAGATGTGC
ATGGAGGAAC GCGGCCTGAT CTTGGTTACC GGCACCACCG GTTCGGGCAA GTCCAGTACC
CTGGCGGCCA TGATCGATAC CATCAACCAG AGCCGCACCT GCAACATCAT CACCATCGAA
GACCCGGTGG AGTTCCTGCA CCGAGACAAC AAGAGCATCA TCAGTCAGCG TGAGGTGGGT
ACGGATACCC CAACCTTTTC CGGAGCGCTC AAGGGTGCAC TGCGTCAGGA CCCGGACGTG
ATCCTGGTGG GCGAGATGCG CGACTACGAG ACCATCGAGA CCGCCCTGAC CGCGGCCGAG
ACCGGCCACC TGGTCATGTC CACCCTGCAC ACCCTGGATG CCGCCGAGAC GGTCAACCGC
ATCATCAGTG TGTTCCCCCC CTACCACCAG CGCCAGGTTC GCATGCAACT GGCCGGGGTC
ATCAAGGGGG TTATCTCCCA GCGCCTGGTG CCCCGGGCCG ACGGCAAGGG ACGCGTGCCG
GCGGTGGAGA TCCTGCTGGG AACCGCCCGC GTGCGGGAAT GCATCGACGA CAAGGACAAG
ACCAAGCAGC TGGGAGACGC CATCGCCCAG GGTTTCATCT CCTACGGCAT GCAGACCTTC
GACCAGTCGC TGATGAAGCT GTTCAGCTCC AAGATGATCA CCTACGAAGA GGCCTTGAGG
CAGTGCTCCA ACCCGGATGA CTTTGCCCTC AAGATCTCCG GCATCTCGTC CACTTCCGAT
TCCTCCTGGG ATGGTTTCGA GCACAGGGAA GATGACGCTT CCGAGCCGGT CAAAGTTGAC
GACAAGATCG AGATCGAAAA ATACTGA
 
Protein sequence
MNLNEILTIA VKAKGSDIHI KTGLPPIVRI DGRLHPIPNA PRLAPDIVGN MAQSMMNDRQ 
RRIFEESSEV DLAYAVPGLG RFRVSVYRQR GTVAMVFRAI SFAIPTLDGL NLPPVIKKMC
MEERGLILVT GTTGSGKSST LAAMIDTINQ SRTCNIITIE DPVEFLHRDN KSIISQREVG
TDTPTFSGAL KGALRQDPDV ILVGEMRDYE TIETALTAAE TGHLVMSTLH TLDAAETVNR
IISVFPPYHQ RQVRMQLAGV IKGVISQRLV PRADGKGRVP AVEILLGTAR VRECIDDKDK
TKQLGDAIAQ GFISYGMQTF DQSLMKLFSS KMITYEEALR QCSNPDDFAL KISGISSTSD
SSWDGFEHRE DDASEPVKVD DKIEIEKY