Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3178 |
Symbol | |
ID | 4573280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 3493059 |
End bp | 3494225 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639757237 |
Product | twitching motility protein |
Protein accession | YP_902829 |
Protein GI | 118581579 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTGA ACGAGATTCT CACCATTGCC GTCAAGGCCA AGGGTTCCGA CATTCACATC AAGACCGGCC TGCCCCCCAT CGTGCGCATC GACGGCAGGC TGCACCCCAT CCCCAATGCC CCCCGGCTGG CACCCGATAT CGTGGGAAAC ATGGCCCAGT CCATGATGAA CGACCGCCAG CGGCGCATCT TCGAGGAAAG TTCCGAGGTG GACCTGGCCT ATGCCGTGCC CGGCCTGGGA CGCTTCAGGG TCAGCGTGTA CCGCCAGCGC GGCACCGTTG CCATGGTCTT TCGCGCCATC TCCTTCGCCA TCCCCACCTT GGATGGTCTC AACCTGCCGC CGGTGATCAA AAAGATGTGC ATGGAGGAAC GCGGCCTGAT CTTGGTTACC GGCACCACCG GTTCGGGCAA GTCCAGTACC CTGGCGGCCA TGATCGATAC CATCAACCAG AGCCGCACCT GCAACATCAT CACCATCGAA GACCCGGTGG AGTTCCTGCA CCGAGACAAC AAGAGCATCA TCAGTCAGCG TGAGGTGGGT ACGGATACCC CAACCTTTTC CGGAGCGCTC AAGGGTGCAC TGCGTCAGGA CCCGGACGTG ATCCTGGTGG GCGAGATGCG CGACTACGAG ACCATCGAGA CCGCCCTGAC CGCGGCCGAG ACCGGCCACC TGGTCATGTC CACCCTGCAC ACCCTGGATG CCGCCGAGAC GGTCAACCGC ATCATCAGTG TGTTCCCCCC CTACCACCAG CGCCAGGTTC GCATGCAACT GGCCGGGGTC ATCAAGGGGG TTATCTCCCA GCGCCTGGTG CCCCGGGCCG ACGGCAAGGG ACGCGTGCCG GCGGTGGAGA TCCTGCTGGG AACCGCCCGC GTGCGGGAAT GCATCGACGA CAAGGACAAG ACCAAGCAGC TGGGAGACGC CATCGCCCAG GGTTTCATCT CCTACGGCAT GCAGACCTTC GACCAGTCGC TGATGAAGCT GTTCAGCTCC AAGATGATCA CCTACGAAGA GGCCTTGAGG CAGTGCTCCA ACCCGGATGA CTTTGCCCTC AAGATCTCCG GCATCTCGTC CACTTCCGAT TCCTCCTGGG ATGGTTTCGA GCACAGGGAA GATGACGCTT CCGAGCCGGT CAAAGTTGAC GACAAGATCG AGATCGAAAA ATACTGA
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Protein sequence | MNLNEILTIA VKAKGSDIHI KTGLPPIVRI DGRLHPIPNA PRLAPDIVGN MAQSMMNDRQ RRIFEESSEV DLAYAVPGLG RFRVSVYRQR GTVAMVFRAI SFAIPTLDGL NLPPVIKKMC MEERGLILVT GTTGSGKSST LAAMIDTINQ SRTCNIITIE DPVEFLHRDN KSIISQREVG TDTPTFSGAL KGALRQDPDV ILVGEMRDYE TIETALTAAE TGHLVMSTLH TLDAAETVNR IISVFPPYHQ RQVRMQLAGV IKGVISQRLV PRADGKGRVP AVEILLGTAR VRECIDDKDK TKQLGDAIAQ GFISYGMQTF DQSLMKLFSS KMITYEEALR QCSNPDDFAL KISGISSTSD SSWDGFEHRE DDASEPVKVD DKIEIEKY
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