Gene Ppro_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3162 
Symbol 
ID4573352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3471347 
End bp3472492 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content62% 
IMG OID639757221 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_902813 
Protein GI118581563 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.541775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAGA AAAAGCAGAC AGCAGGCCGG TCATCCTGTT CGGTGGGGGA TTTCTTTCGA 
CTCGCCTGCG AAGAGCATGG CGCGGCGATG CTCCTGGTCG ATCCGGCACA TGGCGCCATC
GTCAGAGCCA ACCAGCAAGC CTGTGTCCTC CTGGGAGAGA CCGGTTCAGA GTTGGAGGGA
AAGGGAATCA CGGATATTTT CCTGCCGAAT GGGGATATCA GTCCCCCCCG TGACCTCGAA
ACCAATCGCA CCGGCCTGCG CAGAGACACA AACGGCGAGG AGCGACCGAT TGAGATCCTG
CCCCGACGCC TGCCACTGCG GGAGGGAGAC ATCCTCTTCT GCGTGCTGCG CGACATGACG
GAGCCGACCG GGTTTCGGCA TGAACGGGCG GAGCAGGATA ACGTCAGGCG CCAGCTGGAA
ATCGTCGTGG AGGAGAGGAC AGGGCAGCTG AACGAAACCA TGGAGGCACT CAGGCAGGAA
ACAGCCAGAC GCCAGCAGAT CGAAACCAAT GTGACCACCA TGCGGGAAAA CCTGGAAAAC
CAGGAACGCG CGAGGGTGGC CCGCGATATC CACGACGGCA TCGGCCAGAC CCTGCAGGCG
ATAAAACTGC AGCTCAAGAT ACGTCAGGCC CGCTGCAGGG AAGGAGAGCC GTGCGGCGGT
CAGGCACTGA ACGAGATTAT CGGGGAGCTG ACGTCGGCCG CCACGGAACT GCGTGAAATT
ATTTTGGCTC TACGGCCGCT GTTCCTGGAG GACACCGACC TGGACCTGGC GGTCAGGTCA
CTGTGCGAGC GGAGCGCGAA ACGGACCGGC CTTGACGTGC GGGCGGAGTG TCAGGGCTCA
TTCCGCGGTC TCGGTTCCTC CTTCAAACTC TCTATCTTCC GCATCTGCCA GGAGGCACTC
ACCAACATCG TCAAGCATTC CGGTTGCCGT TCGGCACTCA TCCGCCTGGA ACGCGAGCCG
CATACCATGC GCATCACCAT CCGTGACGAC GGCAGAGGAG GGGTCTCCTG CCCGACCATC
ATCAGCCAGG AAGGATCGGG ACTGGCTATC ATGCGCGAAC GGGCCGAACT TCTGGGCGGC
GCTTTATCCG TCATCTCGCC ACCCGGCATG GGCACCGCCA TCACCGTGGA GGTACCGTTG
CAATGA
 
Protein sequence
MGEKKQTAGR SSCSVGDFFR LACEEHGAAM LLVDPAHGAI VRANQQACVL LGETGSELEG 
KGITDIFLPN GDISPPRDLE TNRTGLRRDT NGEERPIEIL PRRLPLREGD ILFCVLRDMT
EPTGFRHERA EQDNVRRQLE IVVEERTGQL NETMEALRQE TARRQQIETN VTTMRENLEN
QERARVARDI HDGIGQTLQA IKLQLKIRQA RCREGEPCGG QALNEIIGEL TSAATELREI
ILALRPLFLE DTDLDLAVRS LCERSAKRTG LDVRAECQGS FRGLGSSFKL SIFRICQEAL
TNIVKHSGCR SALIRLEREP HTMRITIRDD GRGGVSCPTI ISQEGSGLAI MRERAELLGG
ALSVISPPGM GTAITVEVPL Q