Gene Ppro_3121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3121 
Symbol 
ID4573553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3423803 
End bp3425152 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content55% 
IMG OID639757179 
Productphage integrase family protein 
Protein accessionYP_902772 
Protein GI118581522 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGACT ACCTGGAGGA CGCCATGAAA AAAACGACCT TCACCGACAC CATGATTCGG 
AAACTGAAAC CAACGGAATC CGATTACACC CGGAGCGAGG GAAACGGCTT CACCATCCGC
GTCATGCCCT CCGGTTCAAA AACATGGCTG TACCTCTATG CCTTCGACGG TAAGCGCCGG
AAGATGAACC TGGGGAGTTA TCCAGACGTA ACCCTGGAAA CAGCACGGGG GCGATTTGAG
GACGCCAAAC GGAAGGTGAA GAACAACATT GATCCCATGG CGGAAGCCGA AGAACAAGCG
GAAGAGCGGC GAAAGGCCCC CACAGTTGCC GACCTTGTGC ATGATTACAT CGAGCGCCAC
GCCAAACGAT TCAAGCGGTC ATGGGCGAAG GATGAGCAGA TCCTTAATCG GGAGGTTGTT
CCAGCCTGGG GAAAGCGTAA AGCTGCCGAT GTTACCAAAC GGGACATACT CAGACTGCTT
GAAGAGATCG TGAACCGCAA CGCCCCCGCC ATGGCGAACA ACACCTTTCA GATCATCCGC
AAGATGTTCA ACTGGGCCGT TGAGCAGGAC ATTCTCCAGC ACACCCCCTG CACCGGCGTC
AAGCTCCCCT CCCCTAAGCT CTCCCGCGAC CGTGTGCTTT CAGAGTCCGA AATCAAGACG
CTATGGGAAA ACCTTGGCCG TCCAGACGCG GGTATGTCGG ACGGAGTACG CCGAGCGCTG
CGCCTGATCC TGACAACAGC ACAACGCCCC GGTGAAGTGA CCGGACTGCA TACCAGCGAA
CTTGACGGCT GCTGGTGGAC CATTCCGGCA GAACGCGCAA AGAACGGCAA GACTCACCGA
GTCTACCTGT CTGGCCTTGC TCTGGAGATC ATCAACCAAG CCATAGCTCA AGCCAAGAAA
TCAAGAGAAA CACCATATGA CCAGGAATAC AACGGTTACG TCTTTCCATG CCACCACAAG
AGCAAGGAGA AGCCCATGGG TGACACTGCC CTTGCCGTTG CCGTAGGCCG CGCCCTCGCA
TCTCCACTAA CAGACGATAA AGGCAACCCC CTCTTTACAG CAGCCGGCAA ACCAGCCACC
GAGAACCGAC TTGGAATAGA TCACTTCACC CCGCACGATC TGAGACGCAC AACAGCCACC
TTCATGGCGA GCATGGGCTT TATGGATGAA GTGATCGATG CAGTCCTGAA CCACGCAAAG
CAAGGCGTCA TAAAGGTCTA TAATCAGTAT CGCTATGACG TGGAAAAACA GCAGGCTCTT
GAAACTTGGG AGAACAAGCT GAAAACCATC CTGGCCGGTG ACAAGGTCGT CGACCTGGAC
CAGAAACGCA AGGAACGGAA CGTCGCTTGA
 
Protein sequence
MSDYLEDAMK KTTFTDTMIR KLKPTESDYT RSEGNGFTIR VMPSGSKTWL YLYAFDGKRR 
KMNLGSYPDV TLETARGRFE DAKRKVKNNI DPMAEAEEQA EERRKAPTVA DLVHDYIERH
AKRFKRSWAK DEQILNREVV PAWGKRKAAD VTKRDILRLL EEIVNRNAPA MANNTFQIIR
KMFNWAVEQD ILQHTPCTGV KLPSPKLSRD RVLSESEIKT LWENLGRPDA GMSDGVRRAL
RLILTTAQRP GEVTGLHTSE LDGCWWTIPA ERAKNGKTHR VYLSGLALEI INQAIAQAKK
SRETPYDQEY NGYVFPCHHK SKEKPMGDTA LAVAVGRALA SPLTDDKGNP LFTAAGKPAT
ENRLGIDHFT PHDLRRTTAT FMASMGFMDE VIDAVLNHAK QGVIKVYNQY RYDVEKQQAL
ETWENKLKTI LAGDKVVDLD QKRKERNVA