Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3121 |
Symbol | |
ID | 4573553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3423803 |
End bp | 3425152 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639757179 |
Product | phage integrase family protein |
Protein accession | YP_902772 |
Protein GI | 118581522 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTGACT ACCTGGAGGA CGCCATGAAA AAAACGACCT TCACCGACAC CATGATTCGG AAACTGAAAC CAACGGAATC CGATTACACC CGGAGCGAGG GAAACGGCTT CACCATCCGC GTCATGCCCT CCGGTTCAAA AACATGGCTG TACCTCTATG CCTTCGACGG TAAGCGCCGG AAGATGAACC TGGGGAGTTA TCCAGACGTA ACCCTGGAAA CAGCACGGGG GCGATTTGAG GACGCCAAAC GGAAGGTGAA GAACAACATT GATCCCATGG CGGAAGCCGA AGAACAAGCG GAAGAGCGGC GAAAGGCCCC CACAGTTGCC GACCTTGTGC ATGATTACAT CGAGCGCCAC GCCAAACGAT TCAAGCGGTC ATGGGCGAAG GATGAGCAGA TCCTTAATCG GGAGGTTGTT CCAGCCTGGG GAAAGCGTAA AGCTGCCGAT GTTACCAAAC GGGACATACT CAGACTGCTT GAAGAGATCG TGAACCGCAA CGCCCCCGCC ATGGCGAACA ACACCTTTCA GATCATCCGC AAGATGTTCA ACTGGGCCGT TGAGCAGGAC ATTCTCCAGC ACACCCCCTG CACCGGCGTC AAGCTCCCCT CCCCTAAGCT CTCCCGCGAC CGTGTGCTTT CAGAGTCCGA AATCAAGACG CTATGGGAAA ACCTTGGCCG TCCAGACGCG GGTATGTCGG ACGGAGTACG CCGAGCGCTG CGCCTGATCC TGACAACAGC ACAACGCCCC GGTGAAGTGA CCGGACTGCA TACCAGCGAA CTTGACGGCT GCTGGTGGAC CATTCCGGCA GAACGCGCAA AGAACGGCAA GACTCACCGA GTCTACCTGT CTGGCCTTGC TCTGGAGATC ATCAACCAAG CCATAGCTCA AGCCAAGAAA TCAAGAGAAA CACCATATGA CCAGGAATAC AACGGTTACG TCTTTCCATG CCACCACAAG AGCAAGGAGA AGCCCATGGG TGACACTGCC CTTGCCGTTG CCGTAGGCCG CGCCCTCGCA TCTCCACTAA CAGACGATAA AGGCAACCCC CTCTTTACAG CAGCCGGCAA ACCAGCCACC GAGAACCGAC TTGGAATAGA TCACTTCACC CCGCACGATC TGAGACGCAC AACAGCCACC TTCATGGCGA GCATGGGCTT TATGGATGAA GTGATCGATG CAGTCCTGAA CCACGCAAAG CAAGGCGTCA TAAAGGTCTA TAATCAGTAT CGCTATGACG TGGAAAAACA GCAGGCTCTT GAAACTTGGG AGAACAAGCT GAAAACCATC CTGGCCGGTG ACAAGGTCGT CGACCTGGAC CAGAAACGCA AGGAACGGAA CGTCGCTTGA
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Protein sequence | MSDYLEDAMK KTTFTDTMIR KLKPTESDYT RSEGNGFTIR VMPSGSKTWL YLYAFDGKRR KMNLGSYPDV TLETARGRFE DAKRKVKNNI DPMAEAEEQA EERRKAPTVA DLVHDYIERH AKRFKRSWAK DEQILNREVV PAWGKRKAAD VTKRDILRLL EEIVNRNAPA MANNTFQIIR KMFNWAVEQD ILQHTPCTGV KLPSPKLSRD RVLSESEIKT LWENLGRPDA GMSDGVRRAL RLILTTAQRP GEVTGLHTSE LDGCWWTIPA ERAKNGKTHR VYLSGLALEI INQAIAQAKK SRETPYDQEY NGYVFPCHHK SKEKPMGDTA LAVAVGRALA SPLTDDKGNP LFTAAGKPAT ENRLGIDHFT PHDLRRTTAT FMASMGFMDE VIDAVLNHAK QGVIKVYNQY RYDVEKQQAL ETWENKLKTI LAGDKVVDLD QKRKERNVA
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