Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3117 |
Symbol | |
ID | 4573668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3419274 |
End bp | 3420908 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639757175 |
Product | peptide synthase |
Protein accession | YP_902768 |
Protein GI | 118581518 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0052425 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTCAC ATCTCGTCAA CATCGCAGCC CATCTCCCCC GCATGGCCGA TCTCCAGCCG GACACCCCGG CCATCATCTT CCCCCGTAAC GACATCCAGC TCAGCTTCCG GGAGCTGGAC GAGCTCTCCG ACCGCATCGC CCACGGCCTG ACCGCCATCG GCATCAGCCG CGGCGTACGC ACCGTGCTGA TGGTTCCGCC AGGGCCGGAA TTCTTCGCCC TCACCTTCGC CCTGTTCAAG GTGGCAGCGG TACCGGTACT GGTGGATCCC GGCCTGGGCG TCAAGAACCT GAAGACCTGC CTGGACGAGG CCGAGCCCCA GGCCTTCATC GGCATAACCA AGGCGCACCT GGCCCGACTG CTGTTCGGCT GGGGCAAGGG GAGCATCCAT ACCCTGGTCA CCGTGGGCAG ACGCCTGCTC TGGCGGGGCG CCACCCTCTC CAGCCTGATC GCCGACAGCG ACGAGGAGCC GTTCCCCCCG GCCAGGACCG GCCGGGGAGA GACCGCAGCC ATCCTCTTCA CCAGCGGCAG CACCGGCCCC CCCAAGGGAG CGGTGTACAA CCACGGCAAC TTCGCCGCCC AGGTCAGCGC CCTGCGCCAA TCCTACGGCA TCCGTCCGGG GGAGATCGAC CTGCCCACCT TCCCGCTCTT CGCCCTCTTC GCCCCTGCCC TGGGCATGAC CGCCGTGATC CCCGAGATGG ACTTCACCCG TCCCGGCTCG GTCAACCCGG CCATTATCAT TTCCACCATC CAGCAGTATG GCGCCACCAC CATGTTCGGC TCCCCGGCCC TGATTGATCG GGTCAGCCGC TACGGCGCCC AACAGGGAAT CACGCTCCCG AGCCTGCGGC GGGTCATCTC CGCCGGCGCG CCGGTTCCGG CGGCGGTCAT GGAGCGCTTC AGCGACATGC TCGACCCGGA GACGGAGATA TTCACCCCCT ACGGCGCAAC CGAGGCGCTG CCGGTCTGCT CCATCGGCAG CAGCGAGGTG CTGGCCGAGA CCCGCCATCT GACCGAGCAG GGGCGCGGGG TCTGCGTCGG CCTGCCGGTT GCGGGGATAG ATCTGGCCAT CATCCCCATC AGCGACACCC CCATCCGTCA CTGGGGCGAC GACCTGGCGC TCCCCGACTG GGAGGTGGGG GAGATCACCG TCAAGGGTCC CCAGGTGACC GCCTCCTACC TGAACCGCCC CGAAGCCACC AGCCTGGCCA AGATCCCCGA TCCCTCGGGC GGCTTCTGGC ACCGCATGGG AGACCTAGGC TACCTGGACG GGGAGGGGAG GGTCTGGTTC TGCGGCCGCA AGGCCCACCG GGTGATCACC CCCATGGATA CGCTCTACAC CATCCCGGTG GAGGGGGTCT TCAACAGCCA TCCCCAGGTG AAGCGCAGTG CCCTGGTGGG ACTGGGCAAA CCGGGCAGGC AGCAGCCGGT GCTCTGCGTG GAAACGGAGA CCGGGGTCAG CCAGGAGGAG CATGGCCGCA TCAGGCGCGA ACTTATCGCC CTGGGGAGCA AATATCCCCA CACCAAGTCC ATACTCAAGA TCCTCTTCCA CCCCTCCTTC CCGGTGGACA TCCGCCACAA CGCCAAGATC TTCCGCGAAA AGCTGGCAAT CTGGGCCGCG GAGCAGTCCC GTTGA
|
Protein sequence | MSSHLVNIAA HLPRMADLQP DTPAIIFPRN DIQLSFRELD ELSDRIAHGL TAIGISRGVR TVLMVPPGPE FFALTFALFK VAAVPVLVDP GLGVKNLKTC LDEAEPQAFI GITKAHLARL LFGWGKGSIH TLVTVGRRLL WRGATLSSLI ADSDEEPFPP ARTGRGETAA ILFTSGSTGP PKGAVYNHGN FAAQVSALRQ SYGIRPGEID LPTFPLFALF APALGMTAVI PEMDFTRPGS VNPAIIISTI QQYGATTMFG SPALIDRVSR YGAQQGITLP SLRRVISAGA PVPAAVMERF SDMLDPETEI FTPYGATEAL PVCSIGSSEV LAETRHLTEQ GRGVCVGLPV AGIDLAIIPI SDTPIRHWGD DLALPDWEVG EITVKGPQVT ASYLNRPEAT SLAKIPDPSG GFWHRMGDLG YLDGEGRVWF CGRKAHRVIT PMDTLYTIPV EGVFNSHPQV KRSALVGLGK PGRQQPVLCV ETETGVSQEE HGRIRRELIA LGSKYPHTKS ILKILFHPSF PVDIRHNAKI FREKLAIWAA EQSR
|
| |