| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3113 |
|---|
| Symbol | |
|---|
| ID | 4573664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3416021 |
|---|
| End bp | 3417004 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639757171 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_902764 |
|---|
| Protein GI | 118581514 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2013] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0092623 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGT GGTTTCTGAT CTACGACGGA CGGCAGGAAG GGCCCTACGA TATCCAGCAG
GCCCGCCAGC GGGTACGTGC GGATTCCGGT GGCCATGCCT GGCGCGAGGG GTATGCCGAT
TGGGTACCCA TTTCCCGGGT AGCCGAACTG ATGGAACAGA CGGGTGGCGT TCCGGCGCCA
CCCTCGGGCC GGCGCGCTTC CGACGACATC GACTACAGGA TCGTCGGTTC GGAGATGCAG
TTCGTGGAGA TCGAACTGGA CCCGGGGGAG AGCGTGATCG CCGAGGCGGG CGCCATGATG
TACAAGGATG CCAGCATCAC CATGGAGGCC ATCTTCGGCG ACGGCTCCAG CCAGGGGGGC
GGCTTCACGG ACAAGCTGTT CAGCGCCGGC AAGCGGATCC TGACCGGCGA GAGCCTGTTC
ATGACCCTTT TTACCCAGAG CGGCCAGGGC AAGGCCCGCG CCGCCTTTGC CGCCCCCTAT
CCGGGCAACA TCATCCCGGC CACCTTGGCG AGCCTGGGAG GCACCCTGAT CTGTCAGAAG
GACTGCTTCC TCTGCGCCGC CCGTGGTGTC TCCGTCGGCA TCTTCTTCCA GCGCCGCATC
ATGACCGGCC TGTTCGGCGG CGAGGGTTTT ATCATGCAGA AGCTGGAGGG GGACGGGCTG
GCCTTCCTCC ATGCCGGGGG AACGATCGTG GAGCGGGTGC TCTCGGCGGG GGAAACCCTG
CACGTGGATA CCGGCTGCCT GGTTGCCATG GAGCCGACCG TCAGCTTCGA CATCCAGCAG
GCAGGCAACA TCAAGACTGC ACTGTTCGGC GGCGAGGGAC TGTTCTTTGC CCGGCTGACC
GGGCCGGGCC GGGTCTGGCT CCAGTCGCTC CCCTTCTCGC GCCTGGCTGG CCGCATGCTC
CAGGCCTCTC CCCAGCGGGG CGGCGGCAAG GATGAGGGGT CGCTGCTCGG CTCGCTGGGG
ACGCTGATCG GCGGGGATCG CTGA
|
|---|
| Protein sequence | MTQWFLIYDG RQEGPYDIQQ ARQRVRADSG GHAWREGYAD WVPISRVAEL MEQTGGVPAP
PSGRRASDDI DYRIVGSEMQ FVEIELDPGE SVIAEAGAMM YKDASITMEA IFGDGSSQGG
GFTDKLFSAG KRILTGESLF MTLFTQSGQG KARAAFAAPY PGNIIPATLA SLGGTLICQK
DCFLCAARGV SVGIFFQRRI MTGLFGGEGF IMQKLEGDGL AFLHAGGTIV ERVLSAGETL
HVDTGCLVAM EPTVSFDIQQ AGNIKTALFG GEGLFFARLT GPGRVWLQSL PFSRLAGRML
QASPQRGGGK DEGSLLGSLG TLIGGDR
|
|---|
| |