Gene Ppro_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3088 
SymbolgatA 
ID4573961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3376630 
End bp3378087 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content65% 
IMG OID639757145 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_902741 
Protein GI118581491 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00014479 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTT TCGACCTCAC CCTACATGAA CTGCACGCAA AACTGAAGAG CAAAGAGGTT 
TCCTCCCGCG AGGCGACTTC GGCCATGCTG GACCGCATCG CGGAACTGGA ACCCCGGATC
AACGCGTTCA TCACCGTCAC GCCGGAACGC GCCCTGGCCG AGGCCGAGGC GGCGGACCGG
CGCATCGCGG CGGGTGAGGC GGACGTCCTG ACCGGCATAC CGCTGGCAGT CAAGGATATC
TTCCTCACCG AAGGGACGCT CACCACCTGC GGTTCCCGTA TCCTCAACAA TTTTATCCCC
CCCTACAGCG CAACCTCCTT CGAGAAGCTG AAGCAGCGGG GGATGGTCCT GCTGGGAAAA
CTGAACCAGG ACGAGTTTGC CATGGGATCG TCCAACGAGT CCAGCGCTTC CGGCCCGTGC
CGCAACCCCT GGAACACGGA CTGCATCCCG GGAGGCTCTT CGGGCGGTTC GGCCGCGGCA
ATCGCGGCCC GCCAGGCCAC GGTCACCCTG GGCACGGATA CCGGCGGTTC CATCCGCCAA
CCGGCCTCCC ACTGCGGCTG CGTGGGGCTC AAACCGACCT ACGGCCGGGT CTCGCGCTAC
GGCGTGATCG CCTACGCCTC CTCCCTGGAC CAGGTAGGGC CGCTAACCCG GGATGTCACC
GACTGCGCCA TCATGCTCGG CGCCTTGGCC GGCCACGACC CCAAGGACTC AACCAGCGTC
GACAGGCCGG TTCCCGATTA CCAGGCTGCC CTGACCAACG ACATCAGGGG GCTCAGGATC
GGCCTGCCCA GGGAATACTT CATCGAGGGG CTCGACCCGG ACGTCCAGGC ATCCATGGAC
CAAGCCATCG AGACCTACCG CCGCCTGGGA GCCGAGTTCA CTGAGATATC CCTCCCCCAC
ACCGACTATG CCGTGGCCAG CTACTACCTG ATAGCCACCG CCGAGGCAAG CGCCAACCTG
GCCCGCTACG ACGGCGTCCG CTTCGGCCAT CGCGCCGAGC AGGCCGAGGG GCTGCTGGAG
ATGTACTCCC GGAGCCGCAG CCAGGGCTTC GGCAGCGAGG TCAAACGCCG CATCATGCTG
GGAACCTACG CCCTCTCCTC CGGCTACTAC GACGCTTACT ACCTCAAGGC CCAAAAGGTG
CGGACTCTGA TCATGGCCGA CTTCATCCAG GCCTTCGAGG GAGTCGACCT AATCCTGACC
CCTGTTGCCC CCACACCGGC CTTCAGGATC GGAGAAAAGG TCAACGATCC CCTGCAGATG
TACCTCTCCG ACATTTTCAC CATTCCGGTC AACCTGGCAG GGACCTGCGC CATGTCACTG
CCGGCCGGCA TCAGCGGGCA GGGTTTGCCC ATCGGCGTAC AGTTGATCGG CAAGCCGTTC
GGCGAGGAGA CCATCCTGCG GGCGGCCCAC GCCTTCGAGC AAGCCACCGA ATGGCACAGC
CTGAGGGCGC CGCTGTAG
 
Protein sequence
MDLFDLTLHE LHAKLKSKEV SSREATSAML DRIAELEPRI NAFITVTPER ALAEAEAADR 
RIAAGEADVL TGIPLAVKDI FLTEGTLTTC GSRILNNFIP PYSATSFEKL KQRGMVLLGK
LNQDEFAMGS SNESSASGPC RNPWNTDCIP GGSSGGSAAA IAARQATVTL GTDTGGSIRQ
PASHCGCVGL KPTYGRVSRY GVIAYASSLD QVGPLTRDVT DCAIMLGALA GHDPKDSTSV
DRPVPDYQAA LTNDIRGLRI GLPREYFIEG LDPDVQASMD QAIETYRRLG AEFTEISLPH
TDYAVASYYL IATAEASANL ARYDGVRFGH RAEQAEGLLE MYSRSRSQGF GSEVKRRIML
GTYALSSGYY DAYYLKAQKV RTLIMADFIQ AFEGVDLILT PVAPTPAFRI GEKVNDPLQM
YLSDIFTIPV NLAGTCAMSL PAGISGQGLP IGVQLIGKPF GEETILRAAH AFEQATEWHS
LRAPL