Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3088 |
Symbol | gatA |
ID | 4573961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3376630 |
End bp | 3378087 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639757145 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_902741 |
Protein GI | 118581491 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00014479 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTTT TCGACCTCAC CCTACATGAA CTGCACGCAA AACTGAAGAG CAAAGAGGTT TCCTCCCGCG AGGCGACTTC GGCCATGCTG GACCGCATCG CGGAACTGGA ACCCCGGATC AACGCGTTCA TCACCGTCAC GCCGGAACGC GCCCTGGCCG AGGCCGAGGC GGCGGACCGG CGCATCGCGG CGGGTGAGGC GGACGTCCTG ACCGGCATAC CGCTGGCAGT CAAGGATATC TTCCTCACCG AAGGGACGCT CACCACCTGC GGTTCCCGTA TCCTCAACAA TTTTATCCCC CCCTACAGCG CAACCTCCTT CGAGAAGCTG AAGCAGCGGG GGATGGTCCT GCTGGGAAAA CTGAACCAGG ACGAGTTTGC CATGGGATCG TCCAACGAGT CCAGCGCTTC CGGCCCGTGC CGCAACCCCT GGAACACGGA CTGCATCCCG GGAGGCTCTT CGGGCGGTTC GGCCGCGGCA ATCGCGGCCC GCCAGGCCAC GGTCACCCTG GGCACGGATA CCGGCGGTTC CATCCGCCAA CCGGCCTCCC ACTGCGGCTG CGTGGGGCTC AAACCGACCT ACGGCCGGGT CTCGCGCTAC GGCGTGATCG CCTACGCCTC CTCCCTGGAC CAGGTAGGGC CGCTAACCCG GGATGTCACC GACTGCGCCA TCATGCTCGG CGCCTTGGCC GGCCACGACC CCAAGGACTC AACCAGCGTC GACAGGCCGG TTCCCGATTA CCAGGCTGCC CTGACCAACG ACATCAGGGG GCTCAGGATC GGCCTGCCCA GGGAATACTT CATCGAGGGG CTCGACCCGG ACGTCCAGGC ATCCATGGAC CAAGCCATCG AGACCTACCG CCGCCTGGGA GCCGAGTTCA CTGAGATATC CCTCCCCCAC ACCGACTATG CCGTGGCCAG CTACTACCTG ATAGCCACCG CCGAGGCAAG CGCCAACCTG GCCCGCTACG ACGGCGTCCG CTTCGGCCAT CGCGCCGAGC AGGCCGAGGG GCTGCTGGAG ATGTACTCCC GGAGCCGCAG CCAGGGCTTC GGCAGCGAGG TCAAACGCCG CATCATGCTG GGAACCTACG CCCTCTCCTC CGGCTACTAC GACGCTTACT ACCTCAAGGC CCAAAAGGTG CGGACTCTGA TCATGGCCGA CTTCATCCAG GCCTTCGAGG GAGTCGACCT AATCCTGACC CCTGTTGCCC CCACACCGGC CTTCAGGATC GGAGAAAAGG TCAACGATCC CCTGCAGATG TACCTCTCCG ACATTTTCAC CATTCCGGTC AACCTGGCAG GGACCTGCGC CATGTCACTG CCGGCCGGCA TCAGCGGGCA GGGTTTGCCC ATCGGCGTAC AGTTGATCGG CAAGCCGTTC GGCGAGGAGA CCATCCTGCG GGCGGCCCAC GCCTTCGAGC AAGCCACCGA ATGGCACAGC CTGAGGGCGC CGCTGTAG
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Protein sequence | MDLFDLTLHE LHAKLKSKEV SSREATSAML DRIAELEPRI NAFITVTPER ALAEAEAADR RIAAGEADVL TGIPLAVKDI FLTEGTLTTC GSRILNNFIP PYSATSFEKL KQRGMVLLGK LNQDEFAMGS SNESSASGPC RNPWNTDCIP GGSSGGSAAA IAARQATVTL GTDTGGSIRQ PASHCGCVGL KPTYGRVSRY GVIAYASSLD QVGPLTRDVT DCAIMLGALA GHDPKDSTSV DRPVPDYQAA LTNDIRGLRI GLPREYFIEG LDPDVQASMD QAIETYRRLG AEFTEISLPH TDYAVASYYL IATAEASANL ARYDGVRFGH RAEQAEGLLE MYSRSRSQGF GSEVKRRIML GTYALSSGYY DAYYLKAQKV RTLIMADFIQ AFEGVDLILT PVAPTPAFRI GEKVNDPLQM YLSDIFTIPV NLAGTCAMSL PAGISGQGLP IGVQLIGKPF GEETILRAAH AFEQATEWHS LRAPL
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