| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3071 |
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| Symbol | |
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| ID | 4573976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3361139 |
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| End bp | 3363253 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639757128 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_902724 |
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| Protein GI | 118581474 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.678716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACT CTCCAACCAC GGAACAAACC AAAAACATTG TTGCAGAACG TATTCAAGAG
CTTCGTCAAC TCATAGCACA CAACAATCGT TTATATTATG AAAACATTCC TCCACGGCGA
GAGATACATG ATTATGAATA TGACGAGCTT TTCAAGGAAT TGCAGGAACT TGAATCAAGA
TTTCCGGAGT TTCAATCAGC GGACAGTCCG ACTCAAATAG TAGGTGGTTC TGTTTCGGAA
GGATTTAAAA AAGTCCAGCA CTCAGTCCCG ATGTTGTCTA TTGAAAACAA GCCAGTTACA
AAGATGCTTT CTGAAGTAAG GAGTATTATC AAAGAATTAA AAGATGATGC CATATCGATT
GATATTGTAG CCGAGCCAAA AATTGACGGT CTTTCATGCT CAATACGTTA CGAAAAGCAT
CAATTGGTAC GGGCAGCCAC TAGAGGAGAC GGTCTTGAAG GCGAAGACAT TACTGTTAAT
GTCCACTCAA TTAGTGAGAT ACCTAAAATA TTGCCGCTTG ATGCCCCAGA AGTAATAGAA
ATACGGGGCG AAGTGTACAT GTCGAATTCT GATTTTAAAC AGTACACCGC GCAGCAAAAC
AAGATTGGGG AAAAGCCTCC TGAAAACCCT CGTAATGCAG CCGCCGGAAG CTTACGTCAG
CTTGATCCTT CTGTAACCGC ATCTCGTCCG CTCCGCTTCT TTGCGTATGC GTGGGGAGAG
ATTTCCAATT CCTTTGCTAA GAGCCAGTGG GACGCCTTAC AGACCTTGCG TGGATGGGGA
TTTAAGGTAT GTGATGATAT CCGGCTATTG TATTCTTCAG ACGAGCTAAA TTCATATTTT
GAGGAAATGC AAGAGCGCCG TAGTGAACTC GATTTCACCA TTGATGGGAT AGTATACAAG
CTTAACAGCC TATCGCTTCA GGAACGAGTA GGACAGACCA ACCGGGCTCC ACGATGGGCT
GCAGCCCAAA AATTCCCTCC GGAAAAGCGA GAGACTCTTC TACAAAATAT CACAATATCT
GTTGGTCGAA GCGGAGCACT CACCCCAGTC GCAGAACTTT TGCCGGTCCG CCTGCTTGGT
ACTACAGTTT CAAATGCAAC CCTGCATAAC CAGGATGAAG TAGAGTGTAA AGATTTCCGA
ATCGATGACA CCATAGTAGT ACAGCGTGCT GGGGACGTTA TTCCTCAAGT GGTTTCTGTC
GTCATAGAAA AAAGGCTTTC TGGTAGCATT CCGTTTGTTT TTCCGTCAGC CTGCCCAGTC
TGTGGTAGCA AAGCTGTTCG AGAACCAAGA GAAGCTGTCT GGAAATGTAC TGGAGGTCTG
ACATGTCCCG CACAATCATT GGAAAGACTA AAACATTTCG TATCTCGTGA TGCCTTTAAC
ATTGATGGAC TTGGCGAAAA AAACATCGAG TTGTTTTACA ATAAAGGTCT GTTAGCATCT
CCAGTAGATA TATTCAGACT TGAAGAAATT CTTTCACCAC CATTACTTTG GCAACAAAAA
CCATCAGAAT TTAAACCACT GCAAGAATGG GATGGATGGG GTGAGCTTTC CGCCAACAAT
CTTTTTAGGG CTATTCGGAC CAAACAAAAG ATCACACTTT ATCGTTTTAT ATATGCGCTT
GGTATTCCAA AAGTTGGCGA GGTTACAGCA AAGATACTTG CTGATAACTA TGTCAGTCTC
GACAATTGGC AAAGCTCAAT GCTTAAAGCA GCAGAAAGAG AGTCTGAGTG CTATCAACAT
CTAATTTCAA TTGACGGCAT CGGCTCAGTC GTTGCAGATG AAATAGTAAG TTTTTTTGCA
GAAGCCCATA ACATCCAAGT CCTCGATTCT CTGAAAAATT ATCTTAGCGT TGAGGATTTT
ACCAAACCGG CCATAATATC CTCCAATATT TCCGGAAAAA TCGTGGTTTT TACAGGAGAA
TTGGAGAAGC GCAGCCGCAA GGCAGCAAAA ATTGAAGCAG AAAAATTTGG GGCAAAGGTA
GCTACCGATG TATCAAGAAA AACTGACATT GTTATTGCAG GGACAGACCC AGGATCAAAA
TTGCGCAAGG CACAAGAACT AGGAATTAAA ATTCTATCTG AAGATGAGTG GGAGCATCTG
ATCAATGAAA AATGA
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| Protein sequence | MQNSPTTEQT KNIVAERIQE LRQLIAHNNR LYYENIPPRR EIHDYEYDEL FKELQELESR
FPEFQSADSP TQIVGGSVSE GFKKVQHSVP MLSIENKPVT KMLSEVRSII KELKDDAISI
DIVAEPKIDG LSCSIRYEKH QLVRAATRGD GLEGEDITVN VHSISEIPKI LPLDAPEVIE
IRGEVYMSNS DFKQYTAQQN KIGEKPPENP RNAAAGSLRQ LDPSVTASRP LRFFAYAWGE
ISNSFAKSQW DALQTLRGWG FKVCDDIRLL YSSDELNSYF EEMQERRSEL DFTIDGIVYK
LNSLSLQERV GQTNRAPRWA AAQKFPPEKR ETLLQNITIS VGRSGALTPV AELLPVRLLG
TTVSNATLHN QDEVECKDFR IDDTIVVQRA GDVIPQVVSV VIEKRLSGSI PFVFPSACPV
CGSKAVREPR EAVWKCTGGL TCPAQSLERL KHFVSRDAFN IDGLGEKNIE LFYNKGLLAS
PVDIFRLEEI LSPPLLWQQK PSEFKPLQEW DGWGELSANN LFRAIRTKQK ITLYRFIYAL
GIPKVGEVTA KILADNYVSL DNWQSSMLKA AERESECYQH LISIDGIGSV VADEIVSFFA
EAHNIQVLDS LKNYLSVEDF TKPAIISSNI SGKIVVFTGE LEKRSRKAAK IEAEKFGAKV
ATDVSRKTDI VIAGTDPGSK LRKAQELGIK ILSEDEWEHL INEK
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