Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3065 |
Symbol | |
ID | 4574110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3354440 |
End bp | 3356023 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639757122 |
Product | hypothetical protein |
Protein accession | YP_902718 |
Protein GI | 118581468 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00103872 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGATC TCATACGTCA GAAAAAGCAA TCCATCATCA TCAAGGTGGT ATTTGTCGTC ATCGTGCTTT CCTTCATCGG CACCATGTTC CTGGTATGGG GCAAGGGGAG CGACGGGTCC GGGAGTTCCA TGGCCTACGC GGCCAAGGTG AACAGGCACA AAATCTCCCT GGAGGAATTC CAGAACGCCT ACCAGCGCAT GAGAAACATC TACCAACAGA TCTACGGCCA GTCCCTGACG CCGGAAATCG AGAAAACGCT GGGACTGAAA AAGGCGGCCC TGAACAGCTT GATCGACACG GCCCTGATCC TGAAAGAAGC CAAGAAGATG GGCATCACCG CCAGCAAGGA CGAGGTCTCC GGAGCCATCG CCGCCATGCC CATGTTCCAG AAGGACGGCG TTTTCAGCTT CGACCTCTAC CAGCAGTTGC TGAAGAGCAA CCGCATAACC GCCAAGGAGT TCGAGGAAGC GCAACAGCGT GAGCTGATTC TCAAGAAAAC CCGCCAAGCC ATCATAAACA AGGTCGCGGT CAGCGACCAG GAGGCCCTGG ACCTCTTCAG AAAGGAAAAC GACAGGATCG AGCTGGAGTA CCTGAGCTAC GGCCCGGCGG ACGTCATGGG AGAGATTCGG CCGACCGAAG CCGAACTGAA GGAGTTCCTG CAAAAGAACC AGGACAGGTT CAGGACCGCC GAAAAAGCTG AAATTTCCTA CGTGCTCATC GACCCGGCCT CCCAGGCGGC CAGACAGAGC CTGACCGAGG ATGAGATCCA GACCTTCTAC CAGAAGAACA TCGACCGCTG GCAGGGCAAG GACGGTATCC TGCCGCTGGC CGATGTCAGG GAACGGGTCA GGGCCGAGGC CCTGAAACAG AAGGCCGCCC GCCAGGCATT CGAACTGGCC GCCGACACCC TCTTCAAGAA CATCAAGTCA GGCGACCTCA ACCTGATCGC CGCTAAACTG AACCTCAAGC CCCAGCAGAC GCCCCTCTTC TCCGCGGACG CTTCGCCGCC AGCGCTGGCG GGCGAGACCG CCCTGATCAG GAAGGCATTC GAACTCAAGC AGGGTGAACT GGGCGGACCG GTGGAAACCG GCCGGGGAAT CTACATCGTC AAAGTCAGAC AGCGCATCCC TTCCCAGGTA CGGCCGTTGA ACGAGATCAA GGCTCAGGTG GAACAGAGCT TCAAGGCTGC CAAGGCGGTT GATCTGGCCC GCGGCAAGGC CGAGCAGGCT GCCCGTCAGC TTGCGGCAAA GAAACCGCTC TCCAGCCAGA GCACCTCTAG CTTCGGCTTC TCGGCCAAGG GGGACGTCCC TTCCATCGGA AACGCGCCCG ACCTGATGGA GGCAGCCTTC AGGCTGACCA GCGCCAGTCC GGCCGCCACT GCCCCCTTCA AGGTCGGCGA CCGCTGGTAT GCCATCCGCC TGAAGAGCCG CAGCGAAGCG CCCCGTGCCG AGTTCGACAG GACAAAAACA GCCATCAAGC AGGGGATGCT GCCCGTAAAA CAGCAGGAGG CTCTCACAAC CTGGGTGAAA CAGTTGCGAG GCAAGGCAAA GATCGAAATC AATCAGGCAC TCGTCGCCGA CTAA
|
Protein sequence | MLDLIRQKKQ SIIIKVVFVV IVLSFIGTMF LVWGKGSDGS GSSMAYAAKV NRHKISLEEF QNAYQRMRNI YQQIYGQSLT PEIEKTLGLK KAALNSLIDT ALILKEAKKM GITASKDEVS GAIAAMPMFQ KDGVFSFDLY QQLLKSNRIT AKEFEEAQQR ELILKKTRQA IINKVAVSDQ EALDLFRKEN DRIELEYLSY GPADVMGEIR PTEAELKEFL QKNQDRFRTA EKAEISYVLI DPASQAARQS LTEDEIQTFY QKNIDRWQGK DGILPLADVR ERVRAEALKQ KAARQAFELA ADTLFKNIKS GDLNLIAAKL NLKPQQTPLF SADASPPALA GETALIRKAF ELKQGELGGP VETGRGIYIV KVRQRIPSQV RPLNEIKAQV EQSFKAAKAV DLARGKAEQA ARQLAAKKPL SSQSTSSFGF SAKGDVPSIG NAPDLMEAAF RLTSASPAAT APFKVGDRWY AIRLKSRSEA PRAEFDRTKT AIKQGMLPVK QQEALTTWVK QLRGKAKIEI NQALVAD
|
| |