Gene Ppro_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3027 
Symbol 
ID4574282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3308076 
End bp3309383 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content65% 
IMG OID639757081 
Product3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 
Protein accessionYP_902682 
Protein GI118581432 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTACC TGACCTACAA CATACTCTCC CTGTTCCTGC TCATCCCGGC CCTCTTCTAC 
CACCTGTACC GCTCCGTCAA CCGCGGCAGG CCGCCGGCCC TGGGGGAGCG CTTCGGCCGT
ATCCCGACTG AGGATCTGGC CAAGATCAAC GGCCGCCCGG TGATCTGGCT GCACGCAGTA
TCGGTGGGCG AGGCCATCGC GTCCCGGCCG CTACTCAAGG CGCTGCGCCA GCGCTATCCC
GGCCACGCCA TAGTGATGTC CACCACCACC GAAACCGGCC GTTCCCTCGC TGCGGACTTC
CCGGACAAGG ATATCTGCAT CTACTTCCCC TTCGACTTCC TGCCGGCGGT GAGGCGCACC
CTGAATCGCA TCAGACCGGA CCTGATCATC ATCATGGAGA CCGAGATCTG GCCCAACTTC
ACCCGCGAGG CGCATCGGCG CGGCATTCCG CTGATCCTGG CCAATGGCCG CATATCGGAT
CGTTCCTTCA CGGGGTACCT GCGATTCAGC TGGTTCTTCC GCCACCCGCT ACGCCTCTTC
TCCCGGCTCT GCATGCAGAG CACAGCCGAC GCCCGGCGGA TCATCGCCAT CGGCGCCCCC
CCTGAGCGGG TACTCGTCGG CGGCAACCTG AAGTACGATA TCCCCTTCCG CCAGATCCCC
GGGAGCGAGC GACAGGCATT GCGGCACCGC TACGCCATTC CCCACGAGTT GACGGTAATC
ACCGCCGCCA GCACCCACGC CGGCGAGGAG GAACCGGTCA TCGCCAGTTA CCGAGAGCTG
ATGGCATCCC GCGACAACCT GTTCCTGGTG CTCGTACCGC GCCACCCGGA GCGCTGCAGC
GAGGTGGCCG CTGTTTTGGA GCGCAGTGGC ATACCCTACT GCCGCCGCAC GGAACTGGAC
GCCAGGGGGA AGTTGTTCGT CAGAGGCGAG GTACTGCTGG TGGACAGCAT CGGAGAGATG
ATGGGGCTGT ATGCCCTGTC CGACCTGGCC TTCGTGGGGG GGAGCCTGAT CCCCACCGGC
GGGCACAACC TGCTGGAGCC AGCCTCCCTC GGGGTAGCCA GCATTTTCGG CCCCCACATG
ACCAATTTCC GCGAGATCGC CGGTCTGGTG CTGGCCTGCG GAGCCGGTAT CCAGGTCGAT
TCGGCGGCCG GGCTGACCGC CGCCTGTGGC AGACTTTTGG ATGACGCTGC CCTGCGCCGC
ACCATGGGAG CAAACGGCCT GGCCATGATG GAGGAAAACG GCGGCGCCAC TGAGCGCCAC
ATGGGGATGA TCGGCGAACA GTTCGTCGAA CCGGTGGCGA AGGGATGA
 
Protein sequence
MFYLTYNILS LFLLIPALFY HLYRSVNRGR PPALGERFGR IPTEDLAKIN GRPVIWLHAV 
SVGEAIASRP LLKALRQRYP GHAIVMSTTT ETGRSLAADF PDKDICIYFP FDFLPAVRRT
LNRIRPDLII IMETEIWPNF TREAHRRGIP LILANGRISD RSFTGYLRFS WFFRHPLRLF
SRLCMQSTAD ARRIIAIGAP PERVLVGGNL KYDIPFRQIP GSERQALRHR YAIPHELTVI
TAASTHAGEE EPVIASYREL MASRDNLFLV LVPRHPERCS EVAAVLERSG IPYCRRTELD
ARGKLFVRGE VLLVDSIGEM MGLYALSDLA FVGGSLIPTG GHNLLEPASL GVASIFGPHM
TNFREIAGLV LACGAGIQVD SAAGLTAACG RLLDDAALRR TMGANGLAMM EENGGATERH
MGMIGEQFVE PVAKG