| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3025 |
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| Symbol | |
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| ID | 4574315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3305162 |
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| End bp | 3306910 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639757079 |
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| Product | ABC transporter related |
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| Protein accession | YP_902680 |
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| Protein GI | 118581430 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGA CCCTGACCCG CACCCTGGCC TACTTCAAAC CCTACTGGAA ACTGCTGGCG
GTCTCTGCGC TCTGCTCAGC CATCGTGGGG GGCATGGACG GCGCCTTCGC CTACCTGGTG
GAGCCGGTGC TGAAGAAGAT CTTCGCCGGC GGTGAGACCG GCATCTTCCT TTTGATTCCC
CTGGGGATCG TGGCCCTGTT CGCCCTGCGC GGCCTGGCCC GCTTCACCTA CGACTCCACT
ATCCAGCTGG CCGGCCAGAA GGCCATCCAG GACATCCGCA ACCAGGTCTA TGCCAGCACG
GTGCGCATGG ACATGGCCTT CTTCACCCGC CGCTCCACCG GCGAGCTCAT GTCCCACGCC
ACCAACGACA TCAGCACCAT GCAGGCCGGC ATGGCCAACG TGGTCTGCGG CCTGTTCCGC
GAAATCCTCT CCGCCTGTTC GCTCTTGGGG GTGATCTTCT ACCGCAACTG GCAGCTGGCG
CTCTTTTCCT TCGTGGTGAT CCCCCTCACC GCCTACCCGG CCCAGCTGAT CGGCAAGAAG
ATCAAGCGCG CATCGGGCAG GAGCCTGAAT GTCATGGGGG GGCTGACCGC CATCCTCCAG
GAGTCCTTCT CGGGCATCAA GGTCATCAAG GCCTTCGGAC TGGAGGGGAG CGCCATCGAG
CGCTTCCGCG CCAGCAACCG CGACTACTTC ACCCAGTACC GGCAGTACAT CAAGTATGAC
GCCATGTCCA TGCCGGTATC GGAGACCATC ATCTCCTTCG GCATTGCCGC CGTGGTCTAT
TTCGGCGGCA GCCAGGTCAT GTCCGGCCGC ATGACCGCTT CGGAATTCTT CTCGTTCATT
GCCGCCATGG TGATGGTCTT CAACCCGATC AAGAAGCTGC AGAACTCCTA CAACTCCCTG
CAGCGTTCCG CCGGTGCGGC GGAGCGGGTT TTCCGGCTTC TGGACGAGCC GCGCCGAGTA
CAGGAACGCC CCCATGCCGT TGCCCTGGGC CGCTCCACCG GCCTGGTAAT TTTCCGCGAT
GTCTCCTTCA GCTACGGCGA CGAGCCGATC CTGGACGGAG TTTCCTTGGA GGTGCAACCC
AACAGCATGG TGGCGCTGGT GGGACCGTCG GGGAGCGGCA AATCCACGCT GGTGTCACTG
CTGCCCCGCT TCTATGATGT GGCAGGGGGA AGCATCACCA TCGACGGATA CGACATCCGC
GACCTGACCC TGGACTCGCT GGTGAATCAG ATCGCCCTGG TGGACCAGGA AACAACCCTG
TTCCACGACA GCATCGCCAA CAACATCCGC TACGGCAAAC CGCACGCCAC CCTGGACGAG
GTGATGGAGG CAGCCAAAGC CGCCTATGCC CATGATTTCA TCACGCAGCT GCCCGAGGGG
TACGACACCA GCATCGGCGA CCGGGGAGTG AGGCTCTCCG GTGGCCAGCG CCAGCGCATC
TGCATCGCCC GGGCACTGCT CAAAAACGCA CCGATCCTGA TCCTGGACGA GGCCACCAGC
GCCCTGGACA CGGAGAGCGA GCAGATGGTG CAGAAGGCAC TGGACAACCT GATGCAGAAC
CGCACCACCT TCGTGGTCGC CCACCGCCTC TCCACTGTCC AGCACGCCGA CAGCATCGTC
GTGCTGGATG AGGGACGCAT TGTGGAACAG GGTACCCACG AAACACTGCT GGGAGCGGGT
GGTCTGTACA GCCGCCTGCA CGCGCTGCAG TTCAGCGACA GTAGCGCTAT GGAAAACAAC
GGGCCATGA
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| Protein sequence | MNPTLTRTLA YFKPYWKLLA VSALCSAIVG GMDGAFAYLV EPVLKKIFAG GETGIFLLIP
LGIVALFALR GLARFTYDST IQLAGQKAIQ DIRNQVYAST VRMDMAFFTR RSTGELMSHA
TNDISTMQAG MANVVCGLFR EILSACSLLG VIFYRNWQLA LFSFVVIPLT AYPAQLIGKK
IKRASGRSLN VMGGLTAILQ ESFSGIKVIK AFGLEGSAIE RFRASNRDYF TQYRQYIKYD
AMSMPVSETI ISFGIAAVVY FGGSQVMSGR MTASEFFSFI AAMVMVFNPI KKLQNSYNSL
QRSAGAAERV FRLLDEPRRV QERPHAVALG RSTGLVIFRD VSFSYGDEPI LDGVSLEVQP
NSMVALVGPS GSGKSTLVSL LPRFYDVAGG SITIDGYDIR DLTLDSLVNQ IALVDQETTL
FHDSIANNIR YGKPHATLDE VMEAAKAAYA HDFITQLPEG YDTSIGDRGV RLSGGQRQRI
CIARALLKNA PILILDEATS ALDTESEQMV QKALDNLMQN RTTFVVAHRL STVQHADSIV
VLDEGRIVEQ GTHETLLGAG GLYSRLHALQ FSDSSAMENN GP
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